RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 A0A087WZG4 1122 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 NSD3Q9BZ95 1437 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 FYCO1Q9BQS8 1478 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 GTF2A1P52655 376 aaPredicted RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 ZNF354CQ86Y25 554 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 CTNNBL1Q8WYA6 563 aaPredicted RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 NAIPQ13075 1403 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 CCT4P50991 539 aaKnown RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 SYNJ2O15056 1496 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 UBXN4Q92575 508 aa10.89□□□□□ -0.67
ATL3-201ENST00000398868 ZNHIT6Q9NWK9 470 aaKnown RBP10.89□□□□□ -0.67
ATL3-201ENST00000398868 CPLX3Q8WVH0 158 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 ZBTB21Q9ULJ3 1066 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 GOLIM4O00461 696 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
ATL3-201ENST00000398868 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 IMMTQ16891 758 aaKnown RBP10.88□□□□□ -0.67
ATL3-201ENST00000398868 HSP90AA4PQ58FG1 418 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 CFAP65Q6ZU64 1925 aaKnown RBP10.88□□□□□ -0.67
ATL3-201ENST00000398868 KIF20AO95235 890 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 KIAA1328Q86T90 577 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 PPP6R1Q9UPN7 881 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
ATL3-201ENST00000398868 C16orf45Q96MC5 204 aaPredicted RBP10.88□□□□□ -0.67
ATL3-201ENST00000398868 C9orf84Q5VXU9 1444 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 UBE4AQ14139 1066 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 CEP57L1Q8IYX8 460 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 FAM212AQ96EL1 285 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 SHTN1A0MZ66 631 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 URI1O94763 535 aaPredicted RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 MCM4P33991 863 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 CHD1LQ86WJ1 897 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 HELBQ8NG08 1087 aaPredicted RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 LRRC59Q96AG4 307 aaKnown RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 CASQ1P31415 396 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 EIF5P55010 431 aaKnown RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 SPATA32Q96LK8 384 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 NCKAP5LQ9HCH0 1330 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 WDHD1O75717 1129 aaPredicted RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
ATL3-201ENST00000398868 DDX46Q7L014 1031 aaKnown RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 PUS7Q96PZ0 661 aaKnown RBP10.87□□□□□ -0.67
ATL3-201ENST00000398868 K7ELQ4 463 aaPredicted RBP10.86□□□□□ -0.67
ATL3-201ENST00000398868 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATL3-201ENST00000398868 FAM107BQ9H098 131 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 HIP1O00291 1037 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 LMAN1P49257 510 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 STIM1Q13586 685 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 NOL7Q9UMY1 257 aaKnown RBP10.86□□□□□ -0.67
ATL3-201ENST00000398868 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 UBE3BQ7Z3V4 1068 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 ZSCAN30Q86W11 494 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 PKD2L1Q9P0L9 805 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 SBNO2Q9Y2G9 1366 aa10.86□□□□□ -0.67
ATL3-201ENST00000398868 GBP2P32456 591 aaPredicted RBP10.85□□□□□ -0.67
ATL3-201ENST00000398868 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
ATL3-201ENST00000398868 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 CRACR2AQ9BSW2 395 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 BIN1O00499 593 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ATP2B3Q16720 1220 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
ATL3-201ENST00000398868 NLRP5P59047 1200 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 LDHAL6AQ6ZMR3 332 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 GDPD2Q9HCC8 539 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 BMP2KQ9NSY1 1161 aaPredicted RBP10.85□□□□□ -0.67
ATL3-201ENST00000398868 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ANKRD18BA2A2Z9 1011 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 SLC5A1P13866 664 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 CEP63Q96MT8 703 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 STX8Q9UNK0 236 aa10.85□□□□□ -0.67
ATL3-201ENST00000398868 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 IFIT3O14879 490 aaKnown RBP10.84□□□□□ -0.67
ATL3-201ENST00000398868 MNAT1P51948 309 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 ANAPC15P60006 121 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 ST5P78524 1137 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 FNBP4Q8N3X1 1017 aaPredicted RBP10.84□□□□□ -0.67
ATL3-201ENST00000398868 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 MSL1Q68DK7 614 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 COMMD10Q9Y6G5 202 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 TNIP1Q15025 636 aa10.84□□□□□ -0.67
ATL3-201ENST00000398868 C20orf194Q5TEA3 1177 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms