RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
SFTPA1-201ENST00000398636 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
SFTPA1-201ENST00000398636 LY75O60449 1722 aa13.22□□□□□ -0.29
SFTPA1-201ENST00000398636 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 PLSCR1O15162 318 aa13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 PROM2Q8N271 834 aa13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
SFTPA1-201ENST00000398636 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
SFTPA1-201ENST00000398636 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.3
SFTPA1-201ENST00000398636 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
SFTPA1-201ENST00000398636 UBE2Q2Q8WVN8 375 aa13.2□□□□□ -0.3
SFTPA1-201ENST00000398636 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
SFTPA1-201ENST00000398636 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 PTCD1O75127 700 aaKnown RBP13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 APBA3O96018 575 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 SIK1P57059 783 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 TJP1Q07157 1748 aa13.19□□□□□ -0.3
SFTPA1-201ENST00000398636 C5P01031 1676 aa13.18□□□□□ -0.3
SFTPA1-201ENST00000398636 CAMKK2Q96RR4 588 aa13.18□□□□□ -0.3
SFTPA1-201ENST00000398636 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
SFTPA1-201ENST00000398636 ITPK1Q13572 414 aa13.17□□□□□ -0.3
SFTPA1-201ENST00000398636 VAMP4O75379 141 aa13.17□□□□□ -0.3
SFTPA1-201ENST00000398636 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
SFTPA1-201ENST00000398636 SEC24BO95487 1268 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 HOXB7P09629 217 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 KCNQ4P56696 695 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
SFTPA1-201ENST00000398636 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 BCAR3O75815 825 aa13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 IGHDP01880 384 aa13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
SFTPA1-201ENST00000398636 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.31
SFTPA1-201ENST00000398636 ATP6V1AP38606 617 aa13.15□□□□□ -0.31
SFTPA1-201ENST00000398636 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.31
SFTPA1-201ENST00000398636 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.31
SFTPA1-201ENST00000398636 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.31
SFTPA1-201ENST00000398636 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 CCNL1Q9UK58 526 aaPredicted RBP13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 LAMB4A4D0S4 1761 aa13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 RREB1Q92766 1687 aa13.14□□□□□ -0.31
SFTPA1-201ENST00000398636 BAG6P46379 1132 aa13.13□□□□□ -0.31
SFTPA1-201ENST00000398636 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
SFTPA1-201ENST00000398636 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 PDIA6Q15084 440 aa13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 LRP10Q7Z4F1 713 aa13.12□□□□□ -0.31
SFTPA1-201ENST00000398636 NBPF26B4DH59 902 aa13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 NBPF10Q6P3W6 841 aaKnown RBP13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 NBPF15Q8N660 670 aa13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 A1BGP04217 495 aa13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
SFTPA1-201ENST00000398636 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
SFTPA1-201ENST00000398636 STARD3NLO95772 234 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 CRKLP46109 303 aaKnown RBP13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 PROSER3Q2NL68 480 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 ZBTB1Q9Y2K1 713 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
SFTPA1-201ENST00000398636 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 DDX21Q9NR30 783 aaKnown RBP eCLIP13.08□□□□□ -0.32
SFTPA1-201ENST00000398636 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms