RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 STX1AQ16623 288 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 MICALCLQ6ZW33 695 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 YEATS4O95619 227 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 DAPK1P53355 1430 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMF1-201ENST00000398559 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 BIN1O00499 593 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 CCDC82Q8N4S0 544 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMF1-201ENST00000398559 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 MYD88Q99836 296 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
TMF1-201ENST00000398559 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
TMF1-201ENST00000398559 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 NAPBQ9H115 298 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 F6X3S4 739 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 TDRD12Q587J7 1177 aaKnown RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 CCDC196A0A1B0GTZ2 297 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
TMF1-201ENST00000398559 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
TMF1-201ENST00000398559 MCM5P33992 734 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 STX6O43752 255 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 FGFR1OPO95684 399 aaKnown RBP13.65□□□□□ -0.22
TMF1-201ENST00000398559 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
TMF1-201ENST00000398559 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 ZNF213O14771 459 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 CTNNBL1Q8WYA6 563 aaPredicted RBP13.65□□□□□ -0.22
TMF1-201ENST00000398559 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
TMF1-201ENST00000398559 UBE4AQ14139 1066 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 FAM107BQ9H098 131 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
TMF1-201ENST00000398559 ISM2Q6H9L7 571 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
TMF1-201ENST00000398559 LMAN1P49257 510 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 SMC1AQ14683 1233 aaKnown RBP13.64□□□□□ -0.23
TMF1-201ENST00000398559 GOLGA8AA7E2F4 631 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 ANAPC15P60006 121 aa13.64□□□□□ -0.23
TMF1-201ENST00000398559 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMF1-201ENST00000398559 GPATCH11Q8N954 259 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
TMF1-201ENST00000398559 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
TMF1-201ENST00000398559 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
TMF1-201ENST00000398559 SPECC1Q5M775 1068 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 CTCFLQ8NI51 663 aaPredicted RBP13.63□□□□□ -0.23
TMF1-201ENST00000398559 ALS2CR12Q96Q35 445 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
TMF1-201ENST00000398559 UVSSAQ2YD98 709 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 ZNF287Q9HBT7 754 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 ABCC11Q96J66 1382 aa13.63□□□□□ -0.23
TMF1-201ENST00000398559 TRIM27P14373 513 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 NLRP5P59047 1200 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 UBE2HP62256 183 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 BMS1Q14692 1282 aaKnown RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 TNIP1Q15025 636 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 NUDT16Q96DE0 195 aaKnown RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 ZNF165P49910 485 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 NAA15Q9BXJ9 866 aaKnown RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 IFIT3O14879 490 aaKnown RBP13.62□□□□□ -0.23
TMF1-201ENST00000398559 CCDC175P0C221 793 aa13.62□□□□□ -0.23
TMF1-201ENST00000398559 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 ZNF830Q96NB3 372 aaPredicted RBP13.61□□□□□ -0.23
TMF1-201ENST00000398559 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 GOLGA6L9A6NEM1 432 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 STARD3NLO95772 234 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 PRIMPOLQ96LW4 560 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 TMCO5BA8MYB1 307 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
TMF1-201ENST00000398559 KLHL40Q2TBA0 621 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms