RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 USP44Q9H0E7 712 aa18.47■□□□□ 0.55
CFAP53-201ENST00000398545 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
CFAP53-201ENST00000398545 SYCE3A1L190 88 aa18.46■□□□□ 0.55
CFAP53-201ENST00000398545 NUTM2FA1L443 756 aa18.46■□□□□ 0.55
CFAP53-201ENST00000398545 HOXB7P09629 217 aa18.46■□□□□ 0.55
CFAP53-201ENST00000398545 POLA2Q14181 598 aa18.46■□□□□ 0.55
CFAP53-201ENST00000398545 SOX12O15370 315 aa18.46■□□□□ 0.54
CFAP53-201ENST00000398545 HOXC9P31274 260 aa18.46■□□□□ 0.54
CFAP53-201ENST00000398545 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.54
CFAP53-201ENST00000398545 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.54
CFAP53-201ENST00000398545 ZKSCAN5Q9Y2L8 839 aa18.46■□□□□ 0.54
CFAP53-201ENST00000398545 RAD50Q92878 1312 aa18.45■□□□□ 0.54
CFAP53-201ENST00000398545 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
CFAP53-201ENST00000398545 TMEM87AQ8NBN3 555 aa18.45■□□□□ 0.54
CFAP53-201ENST00000398545 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
CFAP53-201ENST00000398545 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
CFAP53-201ENST00000398545 HSP90AB4PQ58FF6 505 aa18.43■□□□□ 0.54
CFAP53-201ENST00000398545 FAM184AQ8NB25 1140 aa18.43■□□□□ 0.54
CFAP53-201ENST00000398545 KIF1BPQ96EK5 621 aa18.43■□□□□ 0.54
CFAP53-201ENST00000398545 TSPY26PQ9H489 355 aa18.43■□□□□ 0.54
CFAP53-201ENST00000398545 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
CFAP53-201ENST00000398545 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
CFAP53-201ENST00000398545 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
CFAP53-201ENST00000398545 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
CFAP53-201ENST00000398545 FER1L4A9Z1Z3 1794 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 SGSM2O43147 1006 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 NLRP6P59044 892 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.41■□□□□ 0.54
CFAP53-201ENST00000398545 CNTROBQ8N137 903 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 RHPN1Q8TCX5 695 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
CFAP53-201ENST00000398545 RPAP1Q9BWH6 1393 aaPredicted RBP18.41■□□□□ 0.54
CFAP53-201ENST00000398545 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
CFAP53-201ENST00000398545 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
CFAP53-201ENST00000398545 TTC41PQ6P2S7 1318 aa18.4■□□□□ 0.54
CFAP53-201ENST00000398545 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.54
CFAP53-201ENST00000398545 PPP1R42Q7Z4L9 355 aa18.39■□□□□ 0.54
CFAP53-201ENST00000398545 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
CFAP53-201ENST00000398545 TTC14Q96N46 770 aa18.39■□□□□ 0.53
CFAP53-201ENST00000398545 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.53
CFAP53-201ENST00000398545 NFAT5O94916 1531 aa18.39■□□□□ 0.53
CFAP53-201ENST00000398545 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
CFAP53-201ENST00000398545 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
CFAP53-201ENST00000398545 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
CFAP53-201ENST00000398545 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
CFAP53-201ENST00000398545 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
CFAP53-201ENST00000398545 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
CFAP53-201ENST00000398545 RGPD2P0DJD1 1756 aa18.38■□□□□ 0.53
CFAP53-201ENST00000398545 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 SIPA1L3O60292 1781 aaPredicted RBP18.37■□□□□ 0.53
CFAP53-201ENST00000398545 NCAPD2Q15021 1401 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 MTX1Q13505 466 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 CHAMP1Q96JM3 812 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
CFAP53-201ENST00000398545 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
CFAP53-201ENST00000398545 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
CFAP53-201ENST00000398545 RUFY2Q8WXA3 655 aa18.36■□□□□ 0.53
CFAP53-201ENST00000398545 IL25Q9H293 177 aa18.36■□□□□ 0.53
CFAP53-201ENST00000398545 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 CCDC183Q5T5S1 534 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 NOL8Q76FK4 1167 aaKnown RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 USP48Q86UV5 1035 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 MAP7D2Q96T17 732 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 HDAC5Q9UQL6 1122 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 GLRX3O76003 335 aaKnown RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
CFAP53-201ENST00000398545 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
CFAP53-201ENST00000398545 LMTK3Q96Q04 1460 aa18.34■□□□□ 0.53
CFAP53-201ENST00000398545 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
CFAP53-201ENST00000398545 UBE2HP62256 183 aa18.33■□□□□ 0.53
CFAP53-201ENST00000398545 TM6SF1Q9BZW5 370 aa18.33■□□□□ 0.52
CFAP53-201ENST00000398545 STX6O43752 255 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 AK2P54819 239 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 ABTB2Q8N961 1025 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 RNF214Q8ND24 703 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 KCNB2Q92953 911 aa18.32■□□□□ 0.52
CFAP53-201ENST00000398545 ZSCAN31Q96LW9 406 aaPredicted RBP18.32■□□□□ 0.52
CFAP53-201ENST00000398545 SH2B1Q9NRF2 756 aaPredicted RBP18.32■□□□□ 0.52
CFAP53-201ENST00000398545 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 GADD45BO75293 160 aaPredicted RBP18.31■□□□□ 0.52
CFAP53-201ENST00000398545 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
CFAP53-201ENST00000398545 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
CFAP53-201ENST00000398545 IP6K1Q92551 441 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
CFAP53-201ENST00000398545 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
CFAP53-201ENST00000398545 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 F13A1P00488 732 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 KIAA2012Q0VF49 1180 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
CFAP53-201ENST00000398545 SMC3Q9UQE7 1217 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms