RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CSPP1Q1MSJ5 1256 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 NBPF1Q3BBV0 1214 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 CASZ1Q86V15 1759 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 ARHGEF25Q86VW2 580 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 MICALL2Q8IY33 904 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 RBM42Q9BTD8 480 aaKnown RBP5.13□□□□□ -1.59
UBE3A-202ENST00000397954 MRC1P22897 1456 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 TMEM88BA6NKF7 163 aa5.12□□□□□ -1.59
UBE3A-202ENST00000397954 QPCTQ16769 361 aa5.12□□□□□ -1.59
UBE3A-202ENST00000397954 SIPA1L3O60292 1781 aaPredicted RBP5.12□□□□□ -1.59
UBE3A-202ENST00000397954 FOXO3O43524 673 aa5.12□□□□□ -1.59
UBE3A-202ENST00000397954 COG3Q96JB2 828 aa5.12□□□□□ -1.59
UBE3A-202ENST00000397954 RGS17Q9UGC6 210 aaPredicted RBP5.12□□□□□ -1.59
UBE3A-202ENST00000397954 DOT1LQ8TEK3 1739 aa5.12□□□□□ -1.59
UBE3A-202ENST00000397954 PTGER2P43116 358 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 PDE4CQ08493 712 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 METTL3Q86U44 580 aaKnown RBP5.11□□□□□ -1.59
UBE3A-202ENST00000397954 TCP11L2Q8N4U5 519 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 ABTB2Q8N961 1025 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 IP6K1Q92551 441 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 PHF12Q96QT6 1004 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 SIN3AQ96ST3 1273 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 QTRT2Q9H974 415 aaKnown RBP5.11□□□□□ -1.59
UBE3A-202ENST00000397954 UBR2Q8IWV8 1755 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 BTAF1O14981 1849 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 TAF1LQ8IZX4 1826 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 KIAA0232Q92628 1395 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 ITGB4P16144 1822 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 GCP02774 474 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 FAM196AQ6ZSG2 479 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 PPP1R12CQ9BZL4 782 aa5.11□□□□□ -1.59
UBE3A-202ENST00000397954 COL5A3P25940 1745 aaPredicted RBP5.11□□□□□ -1.59
UBE3A-202ENST00000397954 TSR1Q2NL82 804 aaKnown RBP5.1□□□□□ -1.59
UBE3A-202ENST00000397954 MRRFQ96E11 262 aaKnown RBP5.1□□□□□ -1.59
UBE3A-202ENST00000397954 VRTNQ9H8Y1 702 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 PRDM11Q9NQV5 511 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 CABP1Q9NZU7 370 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 MAP3K19Q56UN5 1328 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 LAMB4A4D0S4 1761 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 GPR37L1O60883 481 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 TMEM259Q4ZIN3 620 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 PPP2R2DQ66LE6 453 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 ST20-MTHFSA0A0A6YYL1 179 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 PALM3A6NDB9 673 aaPredicted RBP5.1□□□□□ -1.59
UBE3A-202ENST00000397954 LMOD1P29536 600 aaPredicted RBP5.1□□□□□ -1.59
UBE3A-202ENST00000397954 CCER1Q8TC90 406 aaPredicted RBP5.1□□□□□ -1.59
UBE3A-202ENST00000397954 UCN2Q96RP3 112 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 ERBB3P21860 1342 aa5.1□□□□□ -1.59
UBE3A-202ENST00000397954 RBM47A0AV96 593 aaKnown RBP5.09□□□□□ -1.59
UBE3A-202ENST00000397954 KIF3CO14782 793 aa5.09□□□□□ -1.59
UBE3A-202ENST00000397954 HSP90AB1P08238 724 aaKnown RBP5.09□□□□□ -1.59
UBE3A-202ENST00000397954 PRKAR2AP13861 404 aaKnown RBP5.09□□□□□ -1.59
UBE3A-202ENST00000397954 NEUROD1Q13562 356 aa5.09□□□□□ -1.59
UBE3A-202ENST00000397954 NOM1Q5C9Z4 860 aaKnown RBP5.09□□□□□ -1.59
UBE3A-202ENST00000397954 PNNQ9H307 717 aaKnown RBP5.09□□□□□ -1.59
UBE3A-202ENST00000397954 KDRP35968 1356 aa5.09□□□□□ -1.59
UBE3A-202ENST00000397954 RGPD2P0DJD1 1756 aa5.09□□□□□ -1.59
UBE3A-202ENST00000397954 AP1G2O75843 785 aa5.09□□□□□ -1.6
UBE3A-202ENST00000397954 VAC14Q08AM6 782 aa5.09□□□□□ -1.6
UBE3A-202ENST00000397954 C8orf37Q96NL8 207 aa5.09□□□□□ -1.6
UBE3A-202ENST00000397954 PLSCR1O15162 318 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 PAK3O75914 559 aaPredicted RBP5.08□□□□□ -1.6
UBE3A-202ENST00000397954 WWC1Q8IX03 1113 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 RBM33Q96EV2 1170 aaKnown RBP5.08□□□□□ -1.6
UBE3A-202ENST00000397954 KIF13BQ9NQT8 1826 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 COL3A1P02461 1466 aaPredicted RBP5.08□□□□□ -1.6
UBE3A-202ENST00000397954 EVI5O60447 810 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 MYT1Q01538 1121 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 SF3B2Q13435 895 aaKnown RBP5.08□□□□□ -1.6
UBE3A-202ENST00000397954 POTEAQ6S8J7 498 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 KRT27Q7Z3Y8 459 aa5.08□□□□□ -1.6
UBE3A-202ENST00000397954 TOGARAM1Q9Y4F4 1720 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 FAM83GA6ND36 823 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 MAP3K7O43318 606 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 BAG6P46379 1132 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 RIC3Q7Z5B4 369 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 HMX1Q9NP08 348 aaPredicted RBP5.07□□□□□ -1.6
UBE3A-202ENST00000397954 PCDH11XQ9BZA7 1347 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 PCDH11YQ9BZA8 1340 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 PPM1GO15355 546 aaPredicted RBP5.07□□□□□ -1.6
UBE3A-202ENST00000397954 USP17L8P0C7I0 530 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 AMOTQ4VCS5 1084 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 PMFBP1Q8TBY8 1022 aa5.07□□□□□ -1.6
UBE3A-202ENST00000397954 TFIP11Q9UBB9 837 aaKnown RBP5.07□□□□□ -1.6
UBE3A-202ENST00000397954 RTL5Q5HYW3 569 aaPredicted RBP5.06□□□□□ -1.6
UBE3A-202ENST00000397954 DNAJC14Q6Y2X3 702 aaPredicted RBP5.06□□□□□ -1.6
UBE3A-202ENST00000397954 SPIRE2Q8WWL2 714 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 PCDHB15Q9Y5E8 787 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 ARFGEF2Q9Y6D5 1785 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 CACNA1FO60840 1977 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 SMARCA5O60264 1052 aaPredicted RBP5.06□□□□□ -1.6
UBE3A-202ENST00000397954 EVA1CP58658 441 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 EN1Q05925 392 aaPredicted RBP5.06□□□□□ -1.6
UBE3A-202ENST00000397954 NGEFQ8N5V2 710 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 IL2RBP14784 551 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 FLAD1Q8NFF5 587 aa5.06□□□□□ -1.6
UBE3A-202ENST00000397954 HIRIP3Q9BW71 556 aaPredicted RBP5.06□□□□□ -1.6
UBE3A-202ENST00000397954 KDM3BQ7LBC6 1761 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms