RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RBM6P78332 1123 aaKnown RBP24.83■■□□□ 1.56
PDLIM2-205ENST00000397761 AAMPQ13685 434 aa24.83■■□□□ 1.56
PDLIM2-205ENST00000397761 G2E3Q7L622 706 aa24.82■■□□□ 1.56
PDLIM2-205ENST00000397761 ZNF831Q5JPB2 1677 aa24.81■■□□□ 1.56
PDLIM2-205ENST00000397761 EIF2S2P20042 333 aaKnown RBP24.81■■□□□ 1.56
PDLIM2-205ENST00000397761 ATG3Q9NT62 314 aa24.81■■□□□ 1.56
PDLIM2-205ENST00000397761 DBF4Q9UBU7 674 aaPredicted RBP24.81■■□□□ 1.56
PDLIM2-205ENST00000397761 TJP1Q07157 1748 aa24.8■■□□□ 1.56
PDLIM2-205ENST00000397761 PRIM1P49642 420 aaKnown RBP24.8■■□□□ 1.56
PDLIM2-205ENST00000397761 NECTIN2Q92692 538 aa24.8■■□□□ 1.56
PDLIM2-205ENST00000397761 CHPF2Q9P2E5 772 aa24.8■■□□□ 1.56
PDLIM2-205ENST00000397761 FLIIQ13045 1269 aa24.79■■□□□ 1.56
PDLIM2-205ENST00000397761 TMEM57Q8N5G2 664 aa24.79■■□□□ 1.56
PDLIM2-205ENST00000397761 PXDNLA1KZ92 1463 aa24.78■■□□□ 1.56
PDLIM2-205ENST00000397761 VSIG10Q8N0Z9 540 aa24.78■■□□□ 1.56
PDLIM2-205ENST00000397761 ASAP1Q9ULH1 1129 aa24.78■■□□□ 1.56
PDLIM2-205ENST00000397761 BTAF1O14981 1849 aa24.78■■□□□ 1.56
PDLIM2-205ENST00000397761 PDIA6Q15084 440 aa24.77■■□□□ 1.56
PDLIM2-205ENST00000397761 DDX19BQ9UMR2 479 aa24.77■■□□□ 1.56
PDLIM2-205ENST00000397761 INTS3Q68E01 1043 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-205ENST00000397761 DDX21Q9NR30 783 aaKnown RBP eCLIP24.77■■□□□ 1.56
PDLIM2-205ENST00000397761 USP16Q9Y5T5 823 aa24.77■■□□□ 1.56
PDLIM2-205ENST00000397761 ERBB4Q15303 1308 aa24.76■■□□□ 1.55
PDLIM2-205ENST00000397761 SEPT12Q8IYM1 358 aa24.76■■□□□ 1.55
PDLIM2-205ENST00000397761 HYPKQ9NX55 129 aa24.75■■□□□ 1.55
PDLIM2-205ENST00000397761 A0A0G2JS52 829 aa24.74■■□□□ 1.55
PDLIM2-205ENST00000397761 MYT1Q01538 1121 aa24.74■■□□□ 1.55
PDLIM2-205ENST00000397761 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-205ENST00000397761 PTCD1O75127 700 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 PROSER3Q2NL68 480 aa24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 B4GALNT3Q6L9W6 998 aa24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 ITPRIPQ8IWB1 547 aa24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 SYTL4Q96C24 671 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 CCDC136Q96JN2 1154 aa24.73■■□□□ 1.55
PDLIM2-205ENST00000397761 LRP10Q7Z4F1 713 aa24.72■■□□□ 1.55
PDLIM2-205ENST00000397761 TEX13AQ9BXU3 409 aaPredicted RBP24.72■■□□□ 1.55
PDLIM2-205ENST00000397761 RREB1Q92766 1687 aa24.71■■□□□ 1.55
PDLIM2-205ENST00000397761 FKBP5Q13451 457 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-205ENST00000397761 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
PDLIM2-205ENST00000397761 COL5A3P25940 1745 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-205ENST00000397761 LY75O60449 1722 aa24.7■■□□□ 1.54
PDLIM2-205ENST00000397761 ARFGEF2Q9Y6D5 1785 aa24.7■■□□□ 1.54
PDLIM2-205ENST00000397761 ANXA1P04083 346 aa24.7■■□□□ 1.54
PDLIM2-205ENST00000397761 ZBTB40Q9NUA8 1239 aa24.7■■□□□ 1.54
PDLIM2-205ENST00000397761 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
PDLIM2-205ENST00000397761 ZBTB7BO15156 539 aaPredicted RBP24.69■■□□□ 1.54
PDLIM2-205ENST00000397761 ADCY9O60503 1353 aa24.69■■□□□ 1.54
PDLIM2-205ENST00000397761 SLC4A9Q96Q91 983 aa24.69■■□□□ 1.54
PDLIM2-205ENST00000397761 CHMP4BQ9H444 224 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-205ENST00000397761 KCNQ2O43526 872 aa24.68■■□□□ 1.54
PDLIM2-205ENST00000397761 CCT4P50991 539 aaKnown RBP24.68■■□□□ 1.54
PDLIM2-205ENST00000397761 F6X3S4 739 aa24.67■■□□□ 1.54
PDLIM2-205ENST00000397761 SMARCC1Q92922 1105 aaPredicted RBP24.67■■□□□ 1.54
PDLIM2-205ENST00000397761 ATP10DQ9P241 1426 aa24.66■■□□□ 1.54
PDLIM2-205ENST00000397761 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
PDLIM2-205ENST00000397761 NBPF14Q5TI25 921 aa24.66■■□□□ 1.54
PDLIM2-205ENST00000397761 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
PDLIM2-205ENST00000397761 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
PDLIM2-205ENST00000397761 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-205ENST00000397761 DNAJC10Q8IXB1 793 aa24.65■■□□□ 1.54
PDLIM2-205ENST00000397761 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
PDLIM2-205ENST00000397761 PALLDQ8WX93 1383 aa24.65■■□□□ 1.54
PDLIM2-205ENST00000397761 TAF1LQ8IZX4 1826 aa24.64■■□□□ 1.53
PDLIM2-205ENST00000397761 KSR2Q6VAB6 950 aa24.64■■□□□ 1.53
PDLIM2-205ENST00000397761 IBTKQ9P2D0 1353 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 KDM2BQ8NHM5 1336 aa24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 PI4KAP2A4QPH2 592 aa24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 PI4KAP1Q8N8J0 262 aa24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 DNAAF4Q8WXU2 420 aa24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 PCDHB15Q9Y5E8 787 aa24.63■■□□□ 1.53
PDLIM2-205ENST00000397761 AFDNP55196 1824 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-205ENST00000397761 STARD3NLO95772 234 aa24.62■■□□□ 1.53
PDLIM2-205ENST00000397761 CYP19A1P11511 503 aaPredicted RBP24.62■■□□□ 1.53
PDLIM2-205ENST00000397761 MYL6BP14649 208 aa24.62■■□□□ 1.53
PDLIM2-205ENST00000397761 LOC102724428A0A0B4J2F2 783 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 DDX58O95786 925 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 A1BGP04217 495 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 SIK1P57059 783 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 FAM182BQ5T319 152 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 SLC4A10Q6U841 1118 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 XAGE3Q8WTP9 111 aa24.61■■□□□ 1.53
PDLIM2-205ENST00000397761 COPS6Q7L5N1 327 aa24.6■■□□□ 1.53
PDLIM2-205ENST00000397761 UPF1Q92900 1129 aaKnown RBP eCLIP24.6■■□□□ 1.534e-7■■■■■ 26.8
PDLIM2-205ENST00000397761 BEND3Q5T5X7 828 aa24.59■■□□□ 1.53
PDLIM2-205ENST00000397761 PTF1AQ7RTS3 328 aa24.59■■□□□ 1.53
PDLIM2-205ENST00000397761 PIP4K2AP48426 406 aaPredicted RBP24.58■■□□□ 1.53
PDLIM2-205ENST00000397761 FAM196AQ6ZSG2 479 aa24.58■■□□□ 1.53
PDLIM2-205ENST00000397761 MAP3K2Q9Y2U5 619 aa24.58■■□□□ 1.53
PDLIM2-205ENST00000397761 SRCIN1Q9C0H9 1055 aa24.57■■□□□ 1.52
PDLIM2-205ENST00000397761 EP400Q96L91 3159 aa24.57■■□□□ 1.52
PDLIM2-205ENST00000397761 ANKRD36CQ5JPF3 1778 aa24.56■■□□□ 1.52
PDLIM2-205ENST00000397761 AIMP1Q12904 312 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-205ENST00000397761 ANKRD13DQ6ZTN6 518 aa24.56■■□□□ 1.52
PDLIM2-205ENST00000397761 CENPQQ7L2Z9 268 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-205ENST00000397761 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-205ENST00000397761 NUP98P52948 1817 aa24.55■■□□□ 1.52
PDLIM2-205ENST00000397761 ALDH1L1O75891 902 aa24.55■■□□□ 1.52
PDLIM2-205ENST00000397761 ATP6V1AP38606 617 aa24.55■■□□□ 1.52
PDLIM2-205ENST00000397761 ITPK1Q13572 414 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms