RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 BECN2A8MW95 431 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 NCAPD2Q15021 1401 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 SSFA2P28290 1259 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 GPS2Q13227 327 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRD-205ENST00000397611 USP25Q9UHP3 1055 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 HSPA4P34932 840 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 ERC1Q8IUD2 1116 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 KIF1BPQ96EK5 621 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 SLC4A2P04920 1241 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 SPC24Q8NBT2 197 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 RILPL2Q969X0 211 aa6.52□□□□□ -1.37
PTPRD-205ENST00000397611 RFX7Q2KHR2 1363 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 CEMIPQ8WUJ3 1361 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 HOMER1Q86YM7 354 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 FBXW7Q969H0 707 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 PRIMPOLQ96LW4 560 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 ACEP12821 1306 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 NPHP3Q7Z494 1330 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 ELL2O00472 640 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-205ENST00000397611 HMOX1P09601 288 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 NEK4P51957 841 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 MEIS3Q99687 375 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 ARGLU1Q9NWB6 273 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-205ENST00000397611 C14orf37Q86TY3 774 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 THEMISQ8N1K5 641 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-205ENST00000397611 TRERF1Q96PN7 1200 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 CHMLP26374 656 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 MNS1Q8NEH6 495 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 TULP1O00294 542 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-205ENST00000397611 SGSM2O43147 1006 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 POLA2Q14181 598 aa6.51□□□□□ -1.37
PTPRD-205ENST00000397611 THUMPD2Q9BTF0 503 aaKnown RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 ALDH8A1Q9H2A2 487 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 SLC4A10Q6U841 1118 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 TMX3Q96JJ7 454 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 SIGLEC1Q9BZZ2 1709 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 DYNC1I1O14576 645 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 ELP1O95163 1332 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 SPDYE4A6NLX3 237 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 FAM69CQ0P6D2 419 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 PPP4R3BQ5MIZ7 849 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 GORABQ5T7V8 394 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 TSPYL4Q9UJ04 414 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 KIF3AQ9Y496 699 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 SLIT1O75093 1534 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 PATL2C9JE40 543 aaKnown RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 CWC15Q9P013 229 aaKnown RBP6.5□□□□□ -1.37
PTPRD-205ENST00000397611 KNDC1Q76NI1 1749 aa6.5□□□□□ -1.37
PTPRD-205ENST00000397611 AMOTQ4VCS5 1084 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 KCNH5Q8NCM2 988 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 CD2BP2O95400 341 aaKnown RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 UBTFL1P0CB47 393 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 ZKSCAN1P17029 563 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 CLASRPQ8N2M8 674 aaKnown RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 USP44Q9H0E7 712 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 VPS37CA5D8V6 355 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 FKBP5Q13451 457 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-205ENST00000397611 TSGA10IPQ3SY00 556 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 TXNDC2Q86VQ3 553 aa6.49□□□□□ -1.37
PTPRD-205ENST00000397611 ANKRD1Q15327 319 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 HSP90AB2PQ58FF8 381 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 CREBRFQ8IUR6 639 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 CCDC112Q8NEF3 446 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 SCAND2PQ9GZW5 306 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-205ENST00000397611 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 COL15A1P39059 1388 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 SYCE3A1L190 88 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 SOX12O15370 315 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 ERBB4Q15303 1308 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 ZSCAN23Q3MJ62 389 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 LINS1Q8NG48 757 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 UBE2HP62256 183 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 ATL3Q6DD88 541 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.48□□□□□ -1.37
PTPRD-205ENST00000397611 KRT32Q14532 448 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 ECHDC1Q9NTX5 307 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 HMG20BQ9P0W2 317 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 DIP2BQ9P265 1576 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 H3BQV1 296 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 TUBB4AP04350 444 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 IFFO2Q5TF58 517 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 RHPN1Q8TCX5 695 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 EYA1Q99502 592 aa6.48□□□□□ -1.37
PTPRD-205ENST00000397611 RBM42Q9BTD8 480 aaKnown RBP6.48□□□□□ -1.37
PTPRD-205ENST00000397611 DBF4Q9UBU7 674 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-205ENST00000397611 GPATCH3Q96I76 525 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 TRIM5Q9C035 493 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 AMPHP49418 695 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
PTPRD-205ENST00000397611 NUTM2DQ5VT03 806 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms