RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 TSPY26PQ9H489 355 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
CNTN4-201ENST00000397459 PRPF40AO75400 957 aaKnown RBP9.85□□□□□ -0.83
CNTN4-201ENST00000397459 TPM3P06753 285 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 CHMLP26374 656 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 ABTB2Q8N961 1025 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 MAP3K5Q99683 1374 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 HSPA2P54652 639 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 DCTN1Q14203 1278 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.84□□□□□ -0.83
CNTN4-201ENST00000397459 FLIIQ13045 1269 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 C16orf71Q8IYS4 520 aaPredicted RBP9.84□□□□□ -0.83
CNTN4-201ENST00000397459 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 ORAI2Q96SN7 254 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 ZDHHC9Q9Y397 364 aa9.84□□□□□ -0.83
CNTN4-201ENST00000397459 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 DYNC1I1O14576 645 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 MCM10Q7L590 875 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 GPT2Q8TD30 523 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 RBSNQ9H1K0 784 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
CNTN4-201ENST00000397459 HSPA4P34932 840 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
CNTN4-201ENST00000397459 PSME1Q06323 249 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 TTC41PQ6P2S7 1318 aa9.83□□□□□ -0.84
CNTN4-201ENST00000397459 OVOS2A0A0G2JMS6 1433 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 LMTK3Q96Q04 1460 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 UBTFL1P0CB47 393 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 AMPHP49418 695 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 ZGPATQ8N5A5 531 aaKnown RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 OTUD7AQ8TE49 926 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 KIF1BPQ96EK5 621 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 CRYBG1Q9Y4K1 1723 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 RAD50Q92878 1312 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 STRCP1A6NGW2 1772 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 SMARCA5O60264 1052 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 HMGN5P82970 282 aaKnown RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 MTHFSDQ2M296 383 aaKnown RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 CCDC183Q5T5S1 534 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 C19orf44Q9H6X5 657 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
CNTN4-201ENST00000397459 SH2B1Q9NRF2 756 aaPredicted RBP9.82□□□□□ -0.84
CNTN4-201ENST00000397459 HIP1O00291 1037 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 FOXO3O43524 673 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 POLA2Q14181 598 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 TAF7Q15545 349 aaPredicted RBP9.81□□□□□ -0.84
CNTN4-201ENST00000397459 SLC4A10Q6U841 1118 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 SASS6Q6UVJ0 657 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 TM6SF1Q9BZW5 370 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 TMEM63CQ9P1W3 806 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 MED1Q15648 1581 aaPredicted RBP9.81□□□□□ -0.84
CNTN4-201ENST00000397459 KIAA2012Q0VF49 1180 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 ERC1Q8IUD2 1116 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 GPATCH3Q96I76 525 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
CNTN4-201ENST00000397459 NCAPD2Q15021 1401 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 HOXC9P31274 260 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 UBE2HP62256 183 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 XPCQ01831 940 aaPredicted RBP9.8□□□□□ -0.84
CNTN4-201ENST00000397459 TMEM94Q12767 1356 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
CNTN4-201ENST00000397459 EYA1Q99502 592 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 C1orf167Q5SNV9 1468 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 SYCE3A1L190 88 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 SGSM2O43147 1006 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 GLRX3O76003 335 aaKnown RBP9.79□□□□□ -0.84
CNTN4-201ENST00000397459 MTX1Q13505 466 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 CCDC171Q6TFL3 1326 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 LIMCH1Q9UPQ0 1083 aa9.79□□□□□ -0.84
CNTN4-201ENST00000397459 PHRF1Q9P1Y6 1649 aaKnown RBP9.79□□□□□ -0.84
CNTN4-201ENST00000397459 RPAP1Q9BWH6 1393 aaPredicted RBP9.78□□□□□ -0.84
CNTN4-201ENST00000397459 PTMAP06454 111 aaKnown RBP9.78□□□□□ -0.84
CNTN4-201ENST00000397459 PKP1Q13835 747 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 EXOC6BQ9Y2D4 811 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 CEMIPQ8WUJ3 1361 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 ZSCAN22P10073 491 aaPredicted RBP9.78□□□□□ -0.84
CNTN4-201ENST00000397459 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 KCNB2Q92953 911 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 USP25Q9UHP3 1055 aa9.78□□□□□ -0.84
CNTN4-201ENST00000397459 NFAT5O94916 1531 aa9.77□□□□□ -0.84
CNTN4-201ENST00000397459 GOLGA6L6A8MZA4 724 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 ATF3P18847 181 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 PDCP20941 246 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 VPS53Q5VIR6 699 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 G2E3Q7L622 706 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 LRRFIP2Q9Y608 721 aaKnown RBP9.77□□□□□ -0.85
CNTN4-201ENST00000397459 LTN1O94822 1766 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 PLEKHG2Q9H7P9 1386 aa9.77□□□□□ -0.85
CNTN4-201ENST00000397459 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms