RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ANKRD26Q9UPS8 1709 aa13.19□□□□□ -0.3
NEDD9-203ENST00000397378 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
NEDD9-203ENST00000397378 TTLL6Q8N841 843 aa13.18□□□□□ -0.3
NEDD9-203ENST00000397378 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
NEDD9-203ENST00000397378 DDNO94850 711 aaPredicted RBP13.17□□□□□ -0.3
NEDD9-203ENST00000397378 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
NEDD9-203ENST00000397378 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
NEDD9-203ENST00000397378 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
NEDD9-203ENST00000397378 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
NEDD9-203ENST00000397378 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
NEDD9-203ENST00000397378 PHKG2P15735 406 aa13.16□□□□□ -0.3
NEDD9-203ENST00000397378 TNRC18O15417 2968 aaPredicted RBP13.15□□□□□ -0.3
NEDD9-203ENST00000397378 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
NEDD9-203ENST00000397378 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
NEDD9-203ENST00000397378 TM4SF1P30408 202 aa13.14□□□□□ -0.31
NEDD9-203ENST00000397378 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
NEDD9-203ENST00000397378 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
NEDD9-203ENST00000397378 C2CD5Q86YS7 1000 aa13.14□□□□□ -0.31
NEDD9-203ENST00000397378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
NEDD9-203ENST00000397378 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
NEDD9-203ENST00000397378 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
NEDD9-203ENST00000397378 SCN4AP35499 1836 aa13.13□□□□□ -0.31
NEDD9-203ENST00000397378 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
NEDD9-203ENST00000397378 H0YIN7 160 aa13.13□□□□□ -0.31
NEDD9-203ENST00000397378 ZPR1O75312 459 aa13.13□□□□□ -0.31
NEDD9-203ENST00000397378 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
NEDD9-203ENST00000397378 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
NEDD9-203ENST00000397378 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
NEDD9-203ENST00000397378 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
NEDD9-203ENST00000397378 GRM1Q13255 1194 aa13.12□□□□□ -0.31
NEDD9-203ENST00000397378 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
NEDD9-203ENST00000397378 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
NEDD9-203ENST00000397378 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
NEDD9-203ENST00000397378 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
NEDD9-203ENST00000397378 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
NEDD9-203ENST00000397378 C21orf2O43822 256 aa13.11□□□□□ -0.31
NEDD9-203ENST00000397378 MCOLN1Q9GZU1 580 aa13.11□□□□□ -0.31
NEDD9-203ENST00000397378 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
NEDD9-203ENST00000397378 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
NEDD9-203ENST00000397378 PDE4DIPQ5VU43 2346 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
NEDD9-203ENST00000397378 NFIXQ14938 502 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEDD9-203ENST00000397378 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 TJP1Q07157 1748 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
NEDD9-203ENST00000397378 SERPINB2P05120 415 aa13.09□□□□□ -0.31
NEDD9-203ENST00000397378 CABP4P57796 275 aa13.09□□□□□ -0.31
NEDD9-203ENST00000397378 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
NEDD9-203ENST00000397378 CARMIL3Q8ND23 1372 aa13.08□□□□□ -0.31
NEDD9-203ENST00000397378 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 ECE1P42892 770 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
NEDD9-203ENST00000397378 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 EYA1Q99502 592 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
NEDD9-203ENST00000397378 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
NEDD9-203ENST00000397378 DGKZQ13574 1117 aa13.07□□□□□ -0.32
NEDD9-203ENST00000397378 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
NEDD9-203ENST00000397378 L3MBTL3Q96JM7 780 aaPredicted RBP13.07□□□□□ -0.32
NEDD9-203ENST00000397378 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
NEDD9-203ENST00000397378 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
NEDD9-203ENST00000397378 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
NEDD9-203ENST00000397378 CYP4F22Q6NT55 531 aa13.06□□□□□ -0.32
NEDD9-203ENST00000397378 INTS5Q6P9B9 1019 aaKnown RBP13.06□□□□□ -0.32
NEDD9-203ENST00000397378 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
NEDD9-203ENST00000397378 CASP8AP2Q9UKL3 1982 aa13.06□□□□□ -0.32
NEDD9-203ENST00000397378 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
NEDD9-203ENST00000397378 EPHX2P34913 555 aa13.05□□□□□ -0.32
NEDD9-203ENST00000397378 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
NEDD9-203ENST00000397378 SOX10P56693 466 aa13.04□□□□□ -0.32
NEDD9-203ENST00000397378 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
NEDD9-203ENST00000397378 PNMA8AQ86V59 439 aaPredicted RBP13.04□□□□□ -0.32
NEDD9-203ENST00000397378 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
NEDD9-203ENST00000397378 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
NEDD9-203ENST00000397378 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
NEDD9-203ENST00000397378 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
NEDD9-203ENST00000397378 COL15A1P39059 1388 aa13.03□□□□□ -0.32
NEDD9-203ENST00000397378 CA12O43570 354 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 AOC2O75106 756 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 PDE6BP35913 854 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 SLX4Q8IY92 1834 aa13.02□□□□□ -0.33
NEDD9-203ENST00000397378 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
NEDD9-203ENST00000397378 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
NEDD9-203ENST00000397378 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
NEDD9-203ENST00000397378 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
NEDD9-203ENST00000397378 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
NEDD9-203ENST00000397378 TRPM7Q96QT4 1865 aa13□□□□□ -0.33
NEDD9-203ENST00000397378 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
NEDD9-203ENST00000397378 MAP2K2P36507 400 aa13□□□□□ -0.33
NEDD9-203ENST00000397378 MTHFSP49914 203 aa13□□□□□ -0.33
NEDD9-203ENST00000397378 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
NEDD9-203ENST00000397378 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
NEDD9-203ENST00000397378 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms