RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CHMLP26374 656 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 MCM2P49736 904 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 ANAPC15P60006 121 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 ZGPATQ8N5A5 531 aaKnown RBP19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 IL17RAQ96F46 866 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 PKP1Q13835 747 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 ERBB4Q15303 1308 aa19.5■□□□□ 0.71
CCHCR1-202ENST00000396263 HOXB7P09629 217 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 MCCP23508 829 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 MCTP1Q6DN14 999 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 LMBRD1Q9NUN5 540 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 PXDNQ92626 1479 aa19.49■□□□□ 0.71
CCHCR1-202ENST00000396263 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 EPB41L2O43491 1005 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 NEK4P51957 841 aa19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 KCNH5Q8NCM2 988 aa19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 LMO7Q8WWI1 1683 aa19.48■□□□□ 0.71
CCHCR1-202ENST00000396263 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 POLA2Q14181 598 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 BRINP3Q76B58 766 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 ZDHHC9Q9Y397 364 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 NPHP3Q7Z494 1330 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 GCP02774 474 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 RILPL2Q969X0 211 aa19.47■□□□□ 0.71
CCHCR1-202ENST00000396263 ZNF445P59923 1031 aa19.46■□□□□ 0.71
CCHCR1-202ENST00000396263 TMX3Q96JJ7 454 aa19.46■□□□□ 0.71
CCHCR1-202ENST00000396263 NBPF6Q5VWK0 638 aa19.46■□□□□ 0.71
CCHCR1-202ENST00000396263 NBPF4Q96M43 638 aa19.46■□□□□ 0.71
CCHCR1-202ENST00000396263 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
CCHCR1-202ENST00000396263 CUL4AQ13619 759 aa19.45■□□□□ 0.7
CCHCR1-202ENST00000396263 PPP1R42Q7Z4L9 355 aa19.45■□□□□ 0.7
CCHCR1-202ENST00000396263 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
CCHCR1-202ENST00000396263 RGPD2P0DJD1 1756 aa19.45■□□□□ 0.7
CCHCR1-202ENST00000396263 TNS3Q68CZ2 1445 aa19.44■□□□□ 0.7
CCHCR1-202ENST00000396263 UNC5CLQ8IV45 518 aa19.44■□□□□ 0.7
CCHCR1-202ENST00000396263 ANO2Q9NQ90 1003 aa19.44■□□□□ 0.7
CCHCR1-202ENST00000396263 ESPNB1AK53 854 aa19.44■□□□□ 0.7
CCHCR1-202ENST00000396263 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
CCHCR1-202ENST00000396263 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
CCHCR1-202ENST00000396263 ARHGEF25Q86VW2 580 aa19.43■□□□□ 0.7
CCHCR1-202ENST00000396263 SLAIN2Q9P270 581 aa19.43■□□□□ 0.7
CCHCR1-202ENST00000396263 INTS4Q96HW7 963 aaKnown RBP19.43■□□□□ 0.7
CCHCR1-202ENST00000396263 IL1RAPL2Q9NP60 686 aa19.43■□□□□ 0.7
CCHCR1-202ENST00000396263 BEND3Q5T5X7 828 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 RGPD5Q99666 1765 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 SURF6O75683 361 aaKnown RBP19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 EIF2S2P20042 333 aaKnown RBP19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 RHPN1Q8TCX5 695 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
CCHCR1-202ENST00000396263 NASPP49321 788 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 PI4K2BQ8TCG2 481 aa19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 KIF1BPQ96EK5 621 aa19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 CCDC173Q0VFZ6 552 aa19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 ZSCAN23Q3MJ62 389 aa19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
CCHCR1-202ENST00000396263 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 CAVIN1Q6NZI2 390 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
CCHCR1-202ENST00000396263 PI4KAP2A4QPH2 592 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 PRPF40AO75400 957 aaKnown RBP19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 BRD1O95696 1058 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 PI4KAP1Q8N8J0 262 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 HSPA4P34932 840 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 TEFQ10587 303 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 PLEKHO1Q53GL0 409 aaPredicted RBP19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
CCHCR1-202ENST00000396263 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 AMOTQ4VCS5 1084 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 GPT2Q8TD30 523 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 IL25Q9H293 177 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 ADCY9O60503 1353 aa19.38■□□□□ 0.69
CCHCR1-202ENST00000396263 KCNQ3O43525 872 aa19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 ZNF530Q6P9A1 599 aaPredicted RBP19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 ZC3H6P61129 1189 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 NHSL1Q5SYE7 1610 aa19.37■□□□□ 0.69
CCHCR1-202ENST00000396263 MTX1Q13505 466 aa19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 AXIN2Q9Y2T1 843 aa19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 SGSM2O43147 1006 aa19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 SOS2Q07890 1332 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 RAD50Q92878 1312 aa19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 LTBP4Q8N2S1 1624 aa19.36■□□□□ 0.69
CCHCR1-202ENST00000396263 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
CCHCR1-202ENST00000396263 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
CCHCR1-202ENST00000396263 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms