RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 FAM177A1Q8N128 213 aaPredicted RBP15.3■□□□□ 0.04
GREB1-206ENST00000396123 ANO10Q9NW15 660 aa15.3■□□□□ 0.04
GREB1-206ENST00000396123 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
GREB1-206ENST00000396123 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 SDSP20132 328 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
GREB1-206ENST00000396123 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 TSHZ3Q63HK5 1081 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 STX6O43752 255 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 A2MP01023 1474 aa15.29■□□□□ 0.04
GREB1-206ENST00000396123 LUC7LQ9NQ29 371 aaKnown RBP15.29■□□□□ 0.04
GREB1-206ENST00000396123 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
GREB1-206ENST00000396123 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
GREB1-206ENST00000396123 CFAP100Q494V2 611 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
GREB1-206ENST00000396123 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 NAPBQ9H115 298 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 LARP6Q9BRS8 491 aaKnown RBP15.28■□□□□ 0.04
GREB1-206ENST00000396123 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 RHPN1Q8TCX5 695 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 DEF6Q9H4E7 631 aa15.28■□□□□ 0.04
GREB1-206ENST00000396123 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
GREB1-206ENST00000396123 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.04
GREB1-206ENST00000396123 MYO6Q9UM54 1294 aa15.27■□□□□ 0.04
GREB1-206ENST00000396123 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
GREB1-206ENST00000396123 GJB2P29033 226 aa15.27■□□□□ 0.04
GREB1-206ENST00000396123 WDR62O43379 1518 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 ZNF213O14771 459 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 CTAGE5O15320 804 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 POLKQ9UBT6 870 aa15.27■□□□□ 0.03
GREB1-206ENST00000396123 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
GREB1-206ENST00000396123 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 PDE1AP54750 535 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 MAP3K12Q12852 859 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 ZFYVE27Q5T4F4 411 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 IFNL2Q8IZJ0 200 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 CARD14Q9BXL6 1004 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
GREB1-206ENST00000396123 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 TXLNBQ8N3L3 684 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 TANGO6Q9C0B7 1094 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 ZHX3Q9H4I2 956 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 USP25Q9UHP3 1055 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 ZNF652Q9Y2D9 606 aa15.26■□□□□ 0.03
GREB1-206ENST00000396123 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 GUCY1B3Q02153 619 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
GREB1-206ENST00000396123 KIAA0556O60303 1618 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
GREB1-206ENST00000396123 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 MINDY4BA8MYZ0 360 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 PATL2C9JE40 543 aaKnown RBP15.25■□□□□ 0.03
GREB1-206ENST00000396123 KIF2AO00139 706 aaPredicted RBP15.25■□□□□ 0.03
GREB1-206ENST00000396123 ERLIN1O75477 346 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 RLBP1P12271 317 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 CKAP2LQ8IYA6 745 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 TRMT112Q9UI30 125 aaKnown RBP15.25■□□□□ 0.03
GREB1-206ENST00000396123 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
GREB1-206ENST00000396123 CAVIN4Q5BKX8 364 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 PPP1R1BQ9UD71 204 aaPredicted RBP15.24■□□□□ 0.03
GREB1-206ENST00000396123 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 UBE3BQ7Z3V4 1068 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 TNRQ92752 1358 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 ANXA1P04083 346 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
GREB1-206ENST00000396123 SNX21Q969T3 373 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 SYCP1Q15431 976 aa15.24■□□□□ 0.03
GREB1-206ENST00000396123 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
GREB1-206ENST00000396123 GOLIM4O00461 696 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
GREB1-206ENST00000396123 VAMP4O75379 141 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 CCT2P78371 535 aaKnown RBP15.23■□□□□ 0.03
GREB1-206ENST00000396123 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ASXL2Q76L83 1435 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ZNF518AQ6AHZ1 1483 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
GREB1-206ENST00000396123 EPB41L2O43491 1005 aaKnown RBP15.23■□□□□ 0.03
GREB1-206ENST00000396123 UBE2HP62256 183 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 CCDC181Q5TID7 509 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 NEK1Q96PY6 1258 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 SLC5A1P13866 664 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ANAPC15P60006 121 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 ATP8B2P98198 1209 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 CWC25Q9NXE8 425 aaPredicted RBP15.23■□□□□ 0.03
GREB1-206ENST00000396123 SLC12A7Q9Y666 1083 aa15.23■□□□□ 0.03
GREB1-206ENST00000396123 PZPP20742 1482 aa15.22■□□□□ 0.03
GREB1-206ENST00000396123 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms