RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
CCR9-203ENST00000395963 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
CCR9-203ENST00000395963 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
CCR9-203ENST00000395963 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
CCR9-203ENST00000395963 STARD3NLO95772 234 aa11.27□□□□□ -0.61
CCR9-203ENST00000395963 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
CCR9-203ENST00000395963 DDX21Q9NR30 783 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCR9-203ENST00000395963 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
CCR9-203ENST00000395963 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
CCR9-203ENST00000395963 SLC27A3Q5K4L6 730 aa11.26□□□□□ -0.61
CCR9-203ENST00000395963 PLSCR1O15162 318 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 KCNQ3O43525 872 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 SLC39A6Q13433 755 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 ATF7IPQ6VMQ6 1270 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 CNTNAP4Q9C0A0 1308 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
CCR9-203ENST00000395963 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
CCR9-203ENST00000395963 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
CCR9-203ENST00000395963 ASAP1Q9ULH1 1129 aa11.25□□□□□ -0.61
CCR9-203ENST00000395963 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
CCR9-203ENST00000395963 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
CCR9-203ENST00000395963 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
CCR9-203ENST00000395963 SIK1P57059 783 aa11.24□□□□□ -0.61
CCR9-203ENST00000395963 ABCC4O15439 1325 aa11.23□□□□□ -0.61
CCR9-203ENST00000395963 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
CCR9-203ENST00000395963 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
CCR9-203ENST00000395963 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
CCR9-203ENST00000395963 BCAR3O75815 825 aa11.22□□□□□ -0.61
CCR9-203ENST00000395963 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
CCR9-203ENST00000395963 FLIIQ13045 1269 aa11.22□□□□□ -0.61
CCR9-203ENST00000395963 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
CCR9-203ENST00000395963 ELL2O00472 640 aaPredicted RBP11.22□□□□□ -0.61
CCR9-203ENST00000395963 CYP19A1P11511 503 aaPredicted RBP11.22□□□□□ -0.61
CCR9-203ENST00000395963 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
CCR9-203ENST00000395963 A0A087WZG4 1122 aa11.21□□□□□ -0.61
CCR9-203ENST00000395963 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
CCR9-203ENST00000395963 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
CCR9-203ENST00000395963 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
CCR9-203ENST00000395963 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
CCR9-203ENST00000395963 KCNQ2O43526 872 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 PDIA6Q15084 440 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
CCR9-203ENST00000395963 HDAC5Q9UQL6 1122 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
CCR9-203ENST00000395963 TRIM27P14373 513 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 ADRA2BP18089 450 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
CCR9-203ENST00000395963 LRP10Q7Z4F1 713 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 CCDC87Q9NVE4 849 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 DDX19BQ9UMR2 479 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 C4BP0C0L5 1744 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 QSER1Q2KHR3 1735 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 NUP188Q5SRE5 1749 aa11.2□□□□□ -0.62
CCR9-203ENST00000395963 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
CCR9-203ENST00000395963 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
CCR9-203ENST00000395963 KSR2Q6VAB6 950 aa11.19□□□□□ -0.62
CCR9-203ENST00000395963 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
CCR9-203ENST00000395963 HSP90AB3PQ58FF7 597 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
CCR9-203ENST00000395963 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
CCR9-203ENST00000395963 BCORQ6W2J9 1755 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 ARFGEF2Q9Y6D5 1785 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
CCR9-203ENST00000395963 PLBD2Q8NHP8 589 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 FRAT1Q92837 279 aaPredicted RBP11.18□□□□□ -0.62
CCR9-203ENST00000395963 SCN7AQ01118 1682 aa11.18□□□□□ -0.62
CCR9-203ENST00000395963 EIF5P55010 431 aaKnown RBP11.17□□□□□ -0.62
CCR9-203ENST00000395963 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
CCR9-203ENST00000395963 ANKRD36CQ5JPF3 1778 aa11.17□□□□□ -0.62
CCR9-203ENST00000395963 TRIM37O94972 964 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
CCR9-203ENST00000395963 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
CCR9-203ENST00000395963 KIF6Q6ZMV9 814 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 COL15A1P39059 1388 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 PRAMEF22A3QJZ6 481 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 RPS6KA4O75676 772 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 ITPK1Q13572 414 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
CCR9-203ENST00000395963 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 ADCY9O60503 1353 aa11.16□□□□□ -0.62
CCR9-203ENST00000395963 DEKP35659 375 aaKnown RBP11.15□□□□□ -0.62
CCR9-203ENST00000395963 BAG6P46379 1132 aa11.15□□□□□ -0.62
CCR9-203ENST00000395963 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
CCR9-203ENST00000395963 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.62
CCR9-203ENST00000395963 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
CCR9-203ENST00000395963 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
CCR9-203ENST00000395963 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
CCR9-203ENST00000395963 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms