RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZNF496Q96IT1 587 aaPredicted RBP24.19■■□□□ 1.46
CXCL12-204ENST00000395793 ARFGEF1Q9Y6D6 1849 aa24.18■■□□□ 1.46
CXCL12-204ENST00000395793 HEG1Q9ULI3 1381 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 POLRMTO00411 1230 aaKnown RBP24.17■■□□□ 1.46
CXCL12-204ENST00000395793 TM4SF1P30408 202 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 C1QTNF8P60827 252 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 ZNF790Q6PG37 636 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 TTC5Q8N0Z6 440 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 BCL2L12Q9HB09 334 aa24.17■■□□□ 1.46
CXCL12-204ENST00000395793 U2AF1L5P0DN76 240 aaPredicted RBP24.16■■□□□ 1.46
CXCL12-204ENST00000395793 KCNA3P22001 575 aa24.16■■□□□ 1.46
CXCL12-204ENST00000395793 U2AF1Q01081 240 aaKnown RBP eCLIP24.16■■□□□ 1.46
CXCL12-204ENST00000395793 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
CXCL12-204ENST00000395793 SCN7AQ01118 1682 aa24.15■■□□□ 1.46
CXCL12-204ENST00000395793 KCNQ3O43525 872 aa24.15■■□□□ 1.46
CXCL12-204ENST00000395793 GIGYF1O75420 1035 aaPredicted RBP24.15■■□□□ 1.46
CXCL12-204ENST00000395793 NARFQ9UHQ1 456 aa24.15■■□□□ 1.46
CXCL12-204ENST00000395793 BCS1LQ9Y276 419 aa24.15■■□□□ 1.46
CXCL12-204ENST00000395793 ZPR1O75312 459 aa24.14■■□□□ 1.45
CXCL12-204ENST00000395793 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
CXCL12-204ENST00000395793 DLG5Q8TDM6 1919 aa24.14■■□□□ 1.45
CXCL12-204ENST00000395793 EIF5P55010 431 aaKnown RBP24.12■■□□□ 1.45
CXCL12-204ENST00000395793 NFIXQ14938 502 aa24.12■■□□□ 1.45
CXCL12-204ENST00000395793 FCHSD2O94868 740 aa24.11■■□□□ 1.45
CXCL12-204ENST00000395793 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
CXCL12-204ENST00000395793 STARD3NLO95772 234 aa24.1■■□□□ 1.45
CXCL12-204ENST00000395793 CHRNA5P30532 468 aa24.1■■□□□ 1.45
CXCL12-204ENST00000395793 MCM10Q7L590 875 aa24.1■■□□□ 1.45
CXCL12-204ENST00000395793 BTBD11A6QL63 1104 aa24.09■■□□□ 1.45
CXCL12-204ENST00000395793 DCTN1Q14203 1278 aa24.09■■□□□ 1.45
CXCL12-204ENST00000395793 ZNF526Q8TF50 670 aaPredicted RBP24.09■■□□□ 1.45
CXCL12-204ENST00000395793 FMNL2Q96PY5 1086 aa24.09■■□□□ 1.45
CXCL12-204ENST00000395793 BCORQ6W2J9 1755 aa24.08■■□□□ 1.45
CXCL12-204ENST00000395793 ANKRD31Q8N7Z5 1873 aa24.07■■□□□ 1.44
CXCL12-204ENST00000395793 CARMIL3Q8ND23 1372 aa24.07■■□□□ 1.44
CXCL12-204ENST00000395793 A1BGP04217 495 aa24.07■■□□□ 1.44
CXCL12-204ENST00000395793 PRAMEF22A3QJZ6 481 aa24.06■■□□□ 1.44
CXCL12-204ENST00000395793 TEX13AQ9BXU3 409 aaPredicted RBP24.06■■□□□ 1.44
CXCL12-204ENST00000395793 GPBP1L1Q9HC44 474 aaPredicted RBP24.06■■□□□ 1.44
CXCL12-204ENST00000395793 PIM2Q9P1W9 311 aa24.06■■□□□ 1.44
CXCL12-204ENST00000395793 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
CXCL12-204ENST00000395793 SERPINB2P05120 415 aa24.05■■□□□ 1.44
CXCL12-204ENST00000395793 ARHGAP27Q6ZUM4 889 aa24.05■■□□□ 1.44
CXCL12-204ENST00000395793 KDM3BQ7LBC6 1761 aa24.04■■□□□ 1.44
CXCL12-204ENST00000395793 IL6STP40189 918 aaPredicted RBP24.03■■□□□ 1.44
CXCL12-204ENST00000395793 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
CXCL12-204ENST00000395793 TBC1D2BQ9UPU7 963 aa24.03■■□□□ 1.44
CXCL12-204ENST00000395793 ZNF330Q9Y3S2 320 aaPredicted RBP24.03■■□□□ 1.44
CXCL12-204ENST00000395793 USP16Q9Y5T5 823 aa24.03■■□□□ 1.44
CXCL12-204ENST00000395793 SBF1O95248 1867 aa24.02■■□□□ 1.44
CXCL12-204ENST00000395793 COL11A2P13942 1736 aaPredicted RBP24.02■■□□□ 1.44
CXCL12-204ENST00000395793 LAMB4A4D0S4 1761 aa24.02■■□□□ 1.44
CXCL12-204ENST00000395793 A0A087WZG4 1122 aa24.02■■□□□ 1.44
CXCL12-204ENST00000395793 PIP4K2AP48426 406 aaPredicted RBP24.02■■□□□ 1.44
CXCL12-204ENST00000395793 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
CXCL12-204ENST00000395793 TBC1D9BQ66K14 1250 aa24.02■■□□□ 1.44
CXCL12-204ENST00000395793 BICDL1Q6ZP65 573 aa24.02■■□□□ 1.44
CXCL12-204ENST00000395793 HTATSF1O43719 755 aaKnown RBP24.01■■□□□ 1.43
CXCL12-204ENST00000395793 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
CXCL12-204ENST00000395793 CAMTA2O94983 1202 aa23.99■■□□□ 1.43
CXCL12-204ENST00000395793 KIF3CO14782 793 aa23.97■■□□□ 1.43
CXCL12-204ENST00000395793 SNRPA1P09661 255 aaKnown RBP23.97■■□□□ 1.43
CXCL12-204ENST00000395793 MIS18AQ9NYP9 233 aa23.97■■□□□ 1.43
CXCL12-204ENST00000395793 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
CXCL12-204ENST00000395793 NBPF26B4DH59 902 aa23.95■■□□□ 1.42
CXCL12-204ENST00000395793 TAF7Q15545 349 aaPredicted RBP23.95■■□□□ 1.42
CXCL12-204ENST00000395793 PRR5LQ6MZQ0 368 aa23.95■■□□□ 1.42
CXCL12-204ENST00000395793 NBPF10Q6P3W6 841 aaKnown RBP23.95■■□□□ 1.42
CXCL12-204ENST00000395793 DZIP3Q86Y13 1208 aaKnown RBP23.95■■□□□ 1.42
CXCL12-204ENST00000395793 CCDC24Q8N4L8 307 aa23.95■■□□□ 1.42
CXCL12-204ENST00000395793 NBPF15Q8N660 670 aa23.95■■□□□ 1.42
CXCL12-204ENST00000395793 C2CD5Q86YS7 1000 aa23.94■■□□□ 1.42
CXCL12-204ENST00000395793 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
CXCL12-204ENST00000395793 NFE2L2Q16236 605 aa23.93■■□□□ 1.42
CXCL12-204ENST00000395793 CACNA1SQ13698 1873 aa23.93■■□□□ 1.42
CXCL12-204ENST00000395793 CCDC88AQ3V6T2 1871 aa23.93■■□□□ 1.42
CXCL12-204ENST00000395793 RASSF7Q02833 373 aa23.92■■□□□ 1.42
CXCL12-204ENST00000395793 PRELPP51888 382 aa23.91■■□□□ 1.42
CXCL12-204ENST00000395793 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
CXCL12-204ENST00000395793 RNF181Q9P0P0 153 aa23.91■■□□□ 1.42
CXCL12-204ENST00000395793 NEFMP07197 916 aa23.9■■□□□ 1.42
CXCL12-204ENST00000395793 TTLL6Q8N841 843 aa23.9■■□□□ 1.42
CXCL12-204ENST00000395793 NMRK2Q9NPI5 230 aa23.9■■□□□ 1.42
CXCL12-204ENST00000395793 H0YIN7 160 aa23.89■■□□□ 1.41
CXCL12-204ENST00000395793 RALBP1Q15311 655 aa23.89■■□□□ 1.41
CXCL12-204ENST00000395793 TIAM2Q8IVF5 1701 aa23.89■■□□□ 1.41
CXCL12-204ENST00000395793 ARFGEF2Q9Y6D5 1785 aa23.88■■□□□ 1.41
CXCL12-204ENST00000395793 NPM2Q86SE8 214 aaKnown RBP23.88■■□□□ 1.41
CXCL12-204ENST00000395793 SETDB2Q96T68 719 aa23.88■■□□□ 1.41
CXCL12-204ENST00000395793 BRIP1Q9BX63 1249 aa23.88■■□□□ 1.41
CXCL12-204ENST00000395793 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
CXCL12-204ENST00000395793 MAPK8IP3Q9UPT6 1336 aa23.87■■□□□ 1.41
CXCL12-204ENST00000395793 CNBD1Q8NA66 436 aa23.87■■□□□ 1.41
CXCL12-204ENST00000395793 SLX4Q8IY92 1834 aa23.87■■□□□ 1.41
CXCL12-204ENST00000395793 EIF4A1P60842 406 aaKnown RBP23.86■■□□□ 1.41
CXCL12-204ENST00000395793 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
CXCL12-204ENST00000395793 NUP98P52948 1817 aa23.85■■□□□ 1.41
CXCL12-204ENST00000395793 NFKBIEO00221 500 aa23.85■■□□□ 1.41
CXCL12-204ENST00000395793 PDE6BP35913 854 aa23.85■■□□□ 1.41
CXCL12-204ENST00000395793 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms