RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 KDM4AO75164 1064 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-205ENST00000395757 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
SREBF1-205ENST00000395757 HSPA2P54652 639 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 ESYT1Q9BSJ8 1104 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 DNTTIP2Q5QJE6 756 aaKnown RBP17.45■□□□□ 0.38
SREBF1-205ENST00000395757 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
SREBF1-205ENST00000395757 SNX21Q969T3 373 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 MYD88Q99836 296 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
SREBF1-205ENST00000395757 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
SREBF1-205ENST00000395757 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
SREBF1-205ENST00000395757 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
SREBF1-205ENST00000395757 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
SREBF1-205ENST00000395757 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
SREBF1-205ENST00000395757 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
SREBF1-205ENST00000395757 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-205ENST00000395757 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-205ENST00000395757 GPATCH3Q96I76 525 aa17.44■□□□□ 0.38
SREBF1-205ENST00000395757 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
SREBF1-205ENST00000395757 CASTP20810 708 aaKnown RBP17.43■□□□□ 0.38
SREBF1-205ENST00000395757 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
SREBF1-205ENST00000395757 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
SREBF1-205ENST00000395757 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-205ENST00000395757 CHMLP26374 656 aa17.42■□□□□ 0.38
SREBF1-205ENST00000395757 CCDC83Q8IWF9 413 aa17.42■□□□□ 0.38
SREBF1-205ENST00000395757 EDC3Q96F86 508 aaKnown RBP17.42■□□□□ 0.38
SREBF1-205ENST00000395757 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-205ENST00000395757 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
SREBF1-205ENST00000395757 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
SREBF1-205ENST00000395757 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SREBF1-205ENST00000395757 NECAB1Q8N987 351 aa17.41■□□□□ 0.38
SREBF1-205ENST00000395757 IP6K1Q92551 441 aa17.41■□□□□ 0.38
SREBF1-205ENST00000395757 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
SREBF1-205ENST00000395757 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
SREBF1-205ENST00000395757 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-205ENST00000395757 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-205ENST00000395757 PTPRUQ92729 1446 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-205ENST00000395757 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
SREBF1-205ENST00000395757 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
SREBF1-205ENST00000395757 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
SREBF1-205ENST00000395757 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
SREBF1-205ENST00000395757 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
SREBF1-205ENST00000395757 TOM1L2Q6ZVM7 507 aa17.38■□□□□ 0.37
SREBF1-205ENST00000395757 EVA1CP58658 441 aa17.38■□□□□ 0.37
SREBF1-205ENST00000395757 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
SREBF1-205ENST00000395757 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
SREBF1-205ENST00000395757 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
SREBF1-205ENST00000395757 CABP4P57796 275 aa17.37■□□□□ 0.37
SREBF1-205ENST00000395757 FAM43AQ8N2R8 423 aa17.37■□□□□ 0.37
SREBF1-205ENST00000395757 LRRC2Q9BYS8 371 aa17.37■□□□□ 0.37
SREBF1-205ENST00000395757 IL25Q9H293 177 aa17.37■□□□□ 0.37
SREBF1-205ENST00000395757 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
SREBF1-205ENST00000395757 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
SREBF1-205ENST00000395757 PRDM11Q9NQV5 511 aa17.36■□□□□ 0.37
SREBF1-205ENST00000395757 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
SREBF1-205ENST00000395757 PRIM1P49642 420 aaKnown RBP17.35■□□□□ 0.37
SREBF1-205ENST00000395757 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
SREBF1-205ENST00000395757 MED14O60244 1454 aa17.35■□□□□ 0.37
SREBF1-205ENST00000395757 ESPNB1AK53 854 aa17.35■□□□□ 0.37
SREBF1-205ENST00000395757 FAM173BQ6P4H8 233 aa17.35■□□□□ 0.37
SREBF1-205ENST00000395757 RUFY2Q8WXA3 655 aa17.35■□□□□ 0.37
SREBF1-205ENST00000395757 DDX11Q96FC9 970 aa17.35■□□□□ 0.37
SREBF1-205ENST00000395757 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 NEURL4Q96JN8 1562 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 ZSCAN23Q3MJ62 389 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 AK9Q5TCS8 1911 aa17.34■□□□□ 0.37
SREBF1-205ENST00000395757 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
SREBF1-205ENST00000395757 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.37
SREBF1-205ENST00000395757 ADGRB2O60241 1585 aa17.33■□□□□ 0.37
SREBF1-205ENST00000395757 A0A087WZG4 1122 aa17.33■□□□□ 0.36
SREBF1-205ENST00000395757 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-205ENST00000395757 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
SREBF1-205ENST00000395757 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
SREBF1-205ENST00000395757 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
SREBF1-205ENST00000395757 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
SREBF1-205ENST00000395757 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
SREBF1-205ENST00000395757 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
SREBF1-205ENST00000395757 CWC22Q9HCG8 908 aaKnown RBP17.32■□□□□ 0.36
SREBF1-205ENST00000395757 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
SREBF1-205ENST00000395757 ECHDC1Q9NTX5 307 aa17.32■□□□□ 0.36
SREBF1-205ENST00000395757 CRB1P82279 1406 aa17.32■□□□□ 0.36
SREBF1-205ENST00000395757 DIP2BQ9P265 1576 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms