RNA–Protein interactions for RNA: ENST00000395725.7

PTPN20-207, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5 BASIC

Gene PTPN20, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-207ENST00000395725 CHD4Q14839 1912 aa15.31■□□□□ 0.04
PTPN20-207ENST00000395725 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
PTPN20-207ENST00000395725 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
PTPN20-207ENST00000395725 C10orf71Q711Q0 1435 aa15.3■□□□□ 0.04
PTPN20-207ENST00000395725 COL15A1P39059 1388 aa15.3■□□□□ 0.04
PTPN20-207ENST00000395725 ZPR1O75312 459 aa15.29■□□□□ 0.04
PTPN20-207ENST00000395725 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
PTPN20-207ENST00000395725 EIF5P55010 431 aaKnown RBP15.29■□□□□ 0.04
PTPN20-207ENST00000395725 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
PTPN20-207ENST00000395725 MMP10P09238 476 aa15.29■□□□□ 0.04
PTPN20-207ENST00000395725 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
PTPN20-207ENST00000395725 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
PTPN20-207ENST00000395725 TM4SF1P30408 202 aa15.28■□□□□ 0.04
PTPN20-207ENST00000395725 MCM10Q7L590 875 aa15.28■□□□□ 0.04
PTPN20-207ENST00000395725 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
PTPN20-207ENST00000395725 ZBTB1Q9Y2K1 713 aa15.28■□□□□ 0.04
PTPN20-207ENST00000395725 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN20-207ENST00000395725 NRXN2Q9P2S2 1712 aa15.27■□□□□ 0.03
PTPN20-207ENST00000395725 GPR162Q16538 588 aa15.27■□□□□ 0.03
PTPN20-207ENST00000395725 PDZRN3Q9UPQ7 1066 aa15.27■□□□□ 0.03
PTPN20-207ENST00000395725 SCN7AQ01118 1682 aa15.26■□□□□ 0.03
PTPN20-207ENST00000395725 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
PTPN20-207ENST00000395725 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
PTPN20-207ENST00000395725 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
PTPN20-207ENST00000395725 ERBB4Q15303 1308 aa15.25■□□□□ 0.03
PTPN20-207ENST00000395725 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
PTPN20-207ENST00000395725 YY1P25490 414 aa15.24■□□□□ 0.03
PTPN20-207ENST00000395725 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
PTPN20-207ENST00000395725 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
PTPN20-207ENST00000395725 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
PTPN20-207ENST00000395725 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
PTPN20-207ENST00000395725 RIPK4P57078 832 aa15.23■□□□□ 0.03
PTPN20-207ENST00000395725 FKBP8Q14318 412 aa15.23■□□□□ 0.03
PTPN20-207ENST00000395725 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
PTPN20-207ENST00000395725 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
PTPN20-207ENST00000395725 POLRMTO00411 1230 aaKnown RBP15.23■□□□□ 0.03
PTPN20-207ENST00000395725 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
PTPN20-207ENST00000395725 PXDNLA1KZ92 1463 aa15.22■□□□□ 0.03
PTPN20-207ENST00000395725 KCNQ3O43525 872 aa15.22■□□□□ 0.03
PTPN20-207ENST00000395725 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
PTPN20-207ENST00000395725 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
PTPN20-207ENST00000395725 EIF4A1P60842 406 aaKnown RBP15.21■□□□□ 0.03
PTPN20-207ENST00000395725 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
PTPN20-207ENST00000395725 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
PTPN20-207ENST00000395725 GIGYF1O75420 1035 aaPredicted RBP15.2■□□□□ 0.02
PTPN20-207ENST00000395725 DDR1Q08345 913 aa15.2■□□□□ 0.02
PTPN20-207ENST00000395725 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
PTPN20-207ENST00000395725 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
PTPN20-207ENST00000395725 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
PTPN20-207ENST00000395725 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
PTPN20-207ENST00000395725 NFIXQ14938 502 aa15.2■□□□□ 0.02
PTPN20-207ENST00000395725 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
PTPN20-207ENST00000395725 ARFGEF1Q9Y6D6 1849 aa15.19■□□□□ 0.02
PTPN20-207ENST00000395725 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
PTPN20-207ENST00000395725 A1BGP04217 495 aa15.19■□□□□ 0.02
PTPN20-207ENST00000395725 CARMIL3Q8ND23 1372 aa15.18■□□□□ 0.02
PTPN20-207ENST00000395725 HOXB7P09629 217 aa15.18■□□□□ 0.02
PTPN20-207ENST00000395725 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPN20-207ENST00000395725 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
PTPN20-207ENST00000395725 ERVV-1B6SEH8 477 aa15.17■□□□□ 0.02
PTPN20-207ENST00000395725 SERPINB2P05120 415 aa15.17■□□□□ 0.02
PTPN20-207ENST00000395725 DZIP3Q86Y13 1208 aaKnown RBP15.17■□□□□ 0.02
PTPN20-207ENST00000395725 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
PTPN20-207ENST00000395725 CHL1O00533 1208 aa15.17■□□□□ 0.02
PTPN20-207ENST00000395725 ANP32CO43423 234 aa15.17■□□□□ 0.02
PTPN20-207ENST00000395725 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
PTPN20-207ENST00000395725 PIM2Q9P1W9 311 aa15.16■□□□□ 0.02
PTPN20-207ENST00000395725 N4BP2Q86UW6 1770 aaPredicted RBP15.16■□□□□ 0.02
PTPN20-207ENST00000395725 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
PTPN20-207ENST00000395725 IBTKQ9P2D0 1353 aaPredicted RBP15.15■□□□□ 0.02
PTPN20-207ENST00000395725 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
PTPN20-207ENST00000395725 DPEP1P16444 411 aa15.15■□□□□ 0.02
PTPN20-207ENST00000395725 NBPF10Q6P3W6 841 aaKnown RBP15.15■□□□□ 0.02
PTPN20-207ENST00000395725 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
PTPN20-207ENST00000395725 NBPF15Q8N660 670 aa15.15■□□□□ 0.02
PTPN20-207ENST00000395725 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
PTPN20-207ENST00000395725 BRIP1Q9BX63 1249 aa15.15■□□□□ 0.02
PTPN20-207ENST00000395725 KCNA3P22001 575 aa15.14■□□□□ 0.01
PTPN20-207ENST00000395725 PDE6BP35913 854 aa15.14■□□□□ 0.01
PTPN20-207ENST00000395725 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
PTPN20-207ENST00000395725 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 NGEFQ8N5V2 710 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
PTPN20-207ENST00000395725 TBC1D2BQ9UPU7 963 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 ATP10DQ9P241 1426 aa15.13■□□□□ 0.01
PTPN20-207ENST00000395725 DALRD3Q5D0E6 543 aaKnown RBP15.12■□□□□ 0.01
PTPN20-207ENST00000395725 CCDC146Q8IYE0 955 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 IFT57Q9NWB7 429 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 ADCY9O60503 1353 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 A0A0G2JLW4 131 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
PTPN20-207ENST00000395725 GNAI1P63096 354 aa15.11■□□□□ 0.01
PTPN20-207ENST00000395725 ST5P78524 1137 aa15.11■□□□□ 0.01
PTPN20-207ENST00000395725 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
PTPN20-207ENST00000395725 MAP3K15Q6ZN16 1313 aa15.11■□□□□ 0.01
PTPN20-207ENST00000395725 H0YIN7 160 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms