RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 UBR2Q8IWV8 1755 aa21.71■■□□□ 1.07
SNCA-205ENST00000394991 SMC1BQ8NDV3 1235 aa21.71■■□□□ 1.07
SNCA-205ENST00000394991 PCNTO95613 3336 aa21.71■■□□□ 1.07
SNCA-205ENST00000394991 ANKRD31Q8N7Z5 1873 aa21.71■■□□□ 1.07
SNCA-205ENST00000394991 ZPR1O75312 459 aa21.7■■□□□ 1.06
SNCA-205ENST00000394991 NFIXQ14938 502 aa21.7■■□□□ 1.06
SNCA-205ENST00000394991 ZC3H4Q9UPT8 1303 aaKnown RBP21.7■■□□□ 1.06
SNCA-205ENST00000394991 DICER1Q9UPY3 1922 aaKnown RBP21.69■■□□□ 1.06
SNCA-205ENST00000394991 CYP19A1P11511 503 aaPredicted RBP21.69■■□□□ 1.06
SNCA-205ENST00000394991 IL13P35225 146 aa21.69■■□□□ 1.06
SNCA-205ENST00000394991 COL15A1P39059 1388 aa21.69■■□□□ 1.06
SNCA-205ENST00000394991 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
SNCA-205ENST00000394991 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
SNCA-205ENST00000394991 BCL2L12Q9HB09 334 aa21.68■■□□□ 1.06
SNCA-205ENST00000394991 CARMIL3Q8ND23 1372 aa21.68■■□□□ 1.06
SNCA-205ENST00000394991 COL11A2P13942 1736 aaPredicted RBP21.67■■□□□ 1.06
SNCA-205ENST00000394991 SLC39A6Q13433 755 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 AKAP4Q5JQC9 854 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 NARFQ9UHQ1 456 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 ZBTB1Q9Y2K1 713 aa21.67■■□□□ 1.06
SNCA-205ENST00000394991 LMNB1P20700 586 aa21.66■■□□□ 1.06
SNCA-205ENST00000394991 FER1L6Q2WGJ9 1857 aa21.65■■□□□ 1.06
SNCA-205ENST00000394991 GLTPD2A6NH11 291 aa21.65■■□□□ 1.06
SNCA-205ENST00000394991 CAPN15O75808 1086 aa21.65■■□□□ 1.06
SNCA-205ENST00000394991 SCN7AQ01118 1682 aa21.64■■□□□ 1.05
SNCA-205ENST00000394991 SERPINB2P05120 415 aa21.64■■□□□ 1.05
SNCA-205ENST00000394991 CACNA1SQ13698 1873 aa21.64■■□□□ 1.05
SNCA-205ENST00000394991 NFKBIEO00221 500 aa21.63■■□□□ 1.05
SNCA-205ENST00000394991 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
SNCA-205ENST00000394991 HSPA5P11021 654 aaKnown RBP21.63■■□□□ 1.05
SNCA-205ENST00000394991 VEGFAP15692 232 aaPredicted RBP21.63■■□□□ 1.05
SNCA-205ENST00000394991 TNS4Q8IZW8 715 aa21.63■■□□□ 1.05
SNCA-205ENST00000394991 C2CD5Q86YS7 1000 aa21.62■■□□□ 1.05
SNCA-205ENST00000394991 TTLL6Q8N841 843 aa21.62■■□□□ 1.05
SNCA-205ENST00000394991 POTECB2RU33 542 aa21.6■■□□□ 1.05
SNCA-205ENST00000394991 HSPA1AP0DMV8 641 aaKnown RBP21.6■■□□□ 1.05
SNCA-205ENST00000394991 HSPA1BP0DMV9 641 aaKnown RBP21.6■■□□□ 1.05
SNCA-205ENST00000394991 EIF4G2P78344 907 aaKnown RBP eCLIP21.6■■□□□ 1.05
SNCA-205ENST00000394991 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
SNCA-205ENST00000394991 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
SNCA-205ENST00000394991 HMOX1P09601 288 aa21.58■■□□□ 1.05
SNCA-205ENST00000394991 ARFGEF2Q9Y6D5 1785 aa21.58■■□□□ 1.04
SNCA-205ENST00000394991 H0YIN7 160 aa21.57■■□□□ 1.04
SNCA-205ENST00000394991 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
SNCA-205ENST00000394991 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
SNCA-205ENST00000394991 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
SNCA-205ENST00000394991 BICDL1Q6ZP65 573 aa21.56■■□□□ 1.04
SNCA-205ENST00000394991 SLX4Q8IY92 1834 aa21.56■■□□□ 1.04
SNCA-205ENST00000394991 EIF5P55010 431 aaKnown RBP21.55■■□□□ 1.04
SNCA-205ENST00000394991 AMER1Q5JTC6 1135 aaPredicted RBP21.55■■□□□ 1.04
SNCA-205ENST00000394991 KNSTRNQ9Y448 316 aa21.55■■□□□ 1.04
SNCA-205ENST00000394991 BCORQ6W2J9 1755 aa21.54■■□□□ 1.04
SNCA-205ENST00000394991 TBC1D9BQ66K14 1250 aa21.54■■□□□ 1.04
SNCA-205ENST00000394991 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
SNCA-205ENST00000394991 C21orf2O43822 256 aa21.52■■□□□ 1.04
SNCA-205ENST00000394991 CCDC24Q8N4L8 307 aa21.52■■□□□ 1.04
SNCA-205ENST00000394991 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNCA-205ENST00000394991 ZNF219Q9P2Y4 722 aaPredicted RBP21.52■■□□□ 1.04
SNCA-205ENST00000394991 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
SNCA-205ENST00000394991 STARD3NLO95772 234 aa21.5■■□□□ 1.03
SNCA-205ENST00000394991 ERFEQ4G0M1 354 aa21.5■■□□□ 1.03
SNCA-205ENST00000394991 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
SNCA-205ENST00000394991 BRIP1Q9BX63 1249 aa21.5■■□□□ 1.03
SNCA-205ENST00000394991 A0A087WZG4 1122 aa21.49■■□□□ 1.03
SNCA-205ENST00000394991 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
SNCA-205ENST00000394991 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 COL3A1P02461 1466 aaPredicted RBP21.48■■□□□ 1.03
SNCA-205ENST00000394991 POTEIP0CG38 1075 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 POTEJP0CG39 1038 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 PDE6BP35913 854 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 TTC5Q8N0Z6 440 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 TBC1D2BQ9UPU7 963 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 LTBP3Q9NS15 1303 aa21.48■■□□□ 1.03
SNCA-205ENST00000394991 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
SNCA-205ENST00000394991 SCN4AP35499 1836 aa21.47■■□□□ 1.03
SNCA-205ENST00000394991 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
SNCA-205ENST00000394991 CHADLQ6NUI6 762 aa21.46■■□□□ 1.03
SNCA-205ENST00000394991 MKRN1Q9UHC7 482 aaKnown RBP21.46■■□□□ 1.03
SNCA-205ENST00000394991 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
SNCA-205ENST00000394991 DDNO94850 711 aaPredicted RBP21.45■■□□□ 1.02
SNCA-205ENST00000394991 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
SNCA-205ENST00000394991 IL17REQ8NFR9 667 aa21.45■■□□□ 1.02
SNCA-205ENST00000394991 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
SNCA-205ENST00000394991 CREBZFQ9NS37 354 aa21.45■■□□□ 1.02
SNCA-205ENST00000394991 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
SNCA-205ENST00000394991 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
SNCA-205ENST00000394991 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
SNCA-205ENST00000394991 A1BGP04217 495 aa21.43■■□□□ 1.02
SNCA-205ENST00000394991 TEFQ10587 303 aa21.42■■□□□ 1.02
SNCA-205ENST00000394991 STYK1Q6J9G0 422 aa21.42■■□□□ 1.02
SNCA-205ENST00000394991 PRPF40BQ6NWY9 871 aaKnown RBP21.42■■□□□ 1.02
SNCA-205ENST00000394991 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
SNCA-205ENST00000394991 KIF7Q2M1P5 1343 aa21.41■■□□□ 1.02
SNCA-205ENST00000394991 SRGNP10124 158 aa21.41■■□□□ 1.02
SNCA-205ENST00000394991 CNKSR1Q969H4 720 aa21.41■■□□□ 1.02
SNCA-205ENST00000394991 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
SNCA-205ENST00000394991 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
SNCA-205ENST00000394991 CNTNAP1P78357 1384 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms