RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
SIN3A-203ENST00000394949 GTF2F1P35269 517 aaKnown RBP eCLIP20.03■□□□□ 0.81e-7■■■■■ 32.5
SIN3A-203ENST00000394949 CCDC94Q9BW85 323 aaPredicted RBP20.03■□□□□ 0.8
SIN3A-203ENST00000394949 TRMT1Q9NXH9 659 aaKnown RBP20.03■□□□□ 0.8
SIN3A-203ENST00000394949 POLR3GO15318 223 aaPredicted RBP20.02■□□□□ 0.8
SIN3A-203ENST00000394949 RBM25P49756 843 aaKnown RBP20.02■□□□□ 0.8
SIN3A-203ENST00000394949 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
SIN3A-203ENST00000394949 PARD3Q8TEW0 1356 aa20.02■□□□□ 0.8
SIN3A-203ENST00000394949 SYCP1Q15431 976 aa20.02■□□□□ 0.8
SIN3A-203ENST00000394949 TMX3Q96JJ7 454 aa20.02■□□□□ 0.8
SIN3A-203ENST00000394949 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
SIN3A-203ENST00000394949 EIF5P55010 431 aaKnown RBP20.02■□□□□ 0.8
SIN3A-203ENST00000394949 GJB2P29033 226 aa20.02■□□□□ 0.79
SIN3A-203ENST00000394949 ZNF397Q8NF99 534 aaPredicted RBP20.02■□□□□ 0.79
SIN3A-203ENST00000394949 RALGAPBQ86X10 1494 aa20.01■□□□□ 0.79
SIN3A-203ENST00000394949 HMGB2P26583 209 aaKnown RBP20.01■□□□□ 0.79
SIN3A-203ENST00000394949 MICALCLQ6ZW33 695 aa20.01■□□□□ 0.79
SIN3A-203ENST00000394949 CENPHQ9H3R5 247 aa20.01■□□□□ 0.79
SIN3A-203ENST00000394949 ZSCAN22P10073 491 aaPredicted RBP20.01■□□□□ 0.79
SIN3A-203ENST00000394949 TAF4BQ92750 862 aa20.01■□□□□ 0.79
SIN3A-203ENST00000394949 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
SIN3A-203ENST00000394949 FAM200AQ8TCP9 573 aa20.01■□□□□ 0.79
SIN3A-203ENST00000394949 ZFYVE27Q5T4F4 411 aa20■□□□□ 0.79
SIN3A-203ENST00000394949 INCENPQ9NQS7 918 aa20■□□□□ 0.79
SIN3A-203ENST00000394949 C8orf76Q96K31 380 aa20■□□□□ 0.79
SIN3A-203ENST00000394949 KRT18P05783 430 aaKnown RBP20■□□□□ 0.79
SIN3A-203ENST00000394949 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
SIN3A-203ENST00000394949 TANGO6Q9C0B7 1094 aa19.99■□□□□ 0.79
SIN3A-203ENST00000394949 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
SIN3A-203ENST00000394949 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
SIN3A-203ENST00000394949 ZC3H6P61129 1189 aaKnown RBP19.99■□□□□ 0.79
SIN3A-203ENST00000394949 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
SIN3A-203ENST00000394949 SPA17Q15506 151 aa19.98■□□□□ 0.79
SIN3A-203ENST00000394949 DISP3Q9P2K9 1392 aa19.98■□□□□ 0.79
SIN3A-203ENST00000394949 TMC6Q7Z403 805 aa19.98■□□□□ 0.79
SIN3A-203ENST00000394949 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
SIN3A-203ENST00000394949 UBAC1Q9BSL1 405 aa19.97■□□□□ 0.79
SIN3A-203ENST00000394949 ZSCAN16Q9H4T2 348 aaPredicted RBP19.97■□□□□ 0.79
SIN3A-203ENST00000394949 TERF1P54274 439 aa19.97■□□□□ 0.79
SIN3A-203ENST00000394949 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.79
SIN3A-203ENST00000394949 NUP133Q8WUM0 1156 aa19.97■□□□□ 0.79
SIN3A-203ENST00000394949 EVI5LQ96CN4 794 aa19.97■□□□□ 0.79
SIN3A-203ENST00000394949 SMAP1Q8IYB5 467 aaPredicted RBP19.97■□□□□ 0.79
SIN3A-203ENST00000394949 STARD3NLO95772 234 aa19.97■□□□□ 0.79
SIN3A-203ENST00000394949 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
SIN3A-203ENST00000394949 WAPLQ7Z5K2 1190 aa19.96■□□□□ 0.79
SIN3A-203ENST00000394949 BMP2KQ9NSY1 1161 aaPredicted RBP19.96■□□□□ 0.79
SIN3A-203ENST00000394949 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
SIN3A-203ENST00000394949 FEZ1Q99689 392 aa19.96■□□□□ 0.79
SIN3A-203ENST00000394949 SRRTQ9BXP5 876 aaKnown RBP19.96■□□□□ 0.79
SIN3A-203ENST00000394949 NUTM2BA6NNL0 878 aaPredicted RBP19.95■□□□□ 0.78
SIN3A-203ENST00000394949 NUTM2EB1AL46 878 aaPredicted RBP19.95■□□□□ 0.78
SIN3A-203ENST00000394949 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
SIN3A-203ENST00000394949 NUTM2AQ8IVF1 878 aaPredicted RBP19.95■□□□□ 0.78
SIN3A-203ENST00000394949 PLCD4Q9BRC7 762 aa19.95■□□□□ 0.78
SIN3A-203ENST00000394949 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
SIN3A-203ENST00000394949 GIMAP6Q6P9H5 292 aa19.95■□□□□ 0.78
SIN3A-203ENST00000394949 LARP1Q6PKG0 1096 aaKnown RBP19.95■□□□□ 0.78
SIN3A-203ENST00000394949 CUL7Q14999 1698 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 ECHDC1Q9NTX5 307 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 CCDC196A0A1B0GTZ2 297 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 ANKRD18AQ8IVF6 992 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 SDSP20132 328 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
SIN3A-203ENST00000394949 TAF7Q15545 349 aaPredicted RBP19.94■□□□□ 0.78
SIN3A-203ENST00000394949 MCM10Q7L590 875 aa19.94■□□□□ 0.78
SIN3A-203ENST00000394949 IVLP07476 585 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 NEFHP12036 1026 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 SEPT7Q16181 437 aaKnown RBP19.93■□□□□ 0.78
SIN3A-203ENST00000394949 USP48Q86UV5 1035 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 TFIP11Q9UBB9 837 aaKnown RBP19.93■□□□□ 0.78
SIN3A-203ENST00000394949 YEATS4O95619 227 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 PAFAH1B1P43034 410 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 LMAN1P49257 510 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 CCDC186Q7Z3E2 898 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 TAX1BP1Q86VP1 789 aa19.93■□□□□ 0.78
SIN3A-203ENST00000394949 SKILP12757 684 aa19.92■□□□□ 0.78
SIN3A-203ENST00000394949 CNNM3Q8NE01 707 aa19.92■□□□□ 0.78
SIN3A-203ENST00000394949 PHF23Q9BUL5 403 aaPredicted RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
SIN3A-203ENST00000394949 USO1O60763 962 aaKnown RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 ENOX2Q16206 610 aaKnown RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 BOLA2Q9H3K6 86 aa19.92■□□□□ 0.78
SIN3A-203ENST00000394949 SLU7O95391 586 aaKnown RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 SF3B2Q13435 895 aaKnown RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 FKBP15Q5T1M5 1219 aa19.92■□□□□ 0.78
SIN3A-203ENST00000394949 RRAGDQ9NQL2 400 aaPredicted RBP19.92■□□□□ 0.78
SIN3A-203ENST00000394949 IGHMBP2P38935 993 aaKnown RBP19.91■□□□□ 0.78
SIN3A-203ENST00000394949 ARFGAP3Q9NP61 516 aa19.91■□□□□ 0.78
SIN3A-203ENST00000394949 ZNF830Q96NB3 372 aaPredicted RBP19.91■□□□□ 0.78
SIN3A-203ENST00000394949 TRERF1Q96PN7 1200 aa19.91■□□□□ 0.78
SIN3A-203ENST00000394949 TDO2P48775 406 aa19.91■□□□□ 0.78
SIN3A-203ENST00000394949 ATP2B2Q01814 1243 aa19.91■□□□□ 0.78
SIN3A-203ENST00000394949 INTS4Q96HW7 963 aaKnown RBP19.91■□□□□ 0.78
SIN3A-203ENST00000394949 IDI1Q13907 227 aa19.9■□□□□ 0.78
SIN3A-203ENST00000394949 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
SIN3A-203ENST00000394949 PHF8Q9UPP1 1060 aa19.9■□□□□ 0.78
SIN3A-203ENST00000394949 AKAP2Q9Y2D5 859 aa19.9■□□□□ 0.78
SIN3A-203ENST00000394949 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms