RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LRRCC1Q9C099 1032 aa16.52■□□□□ 0.24
GTF2F1-201ENST00000394456 MX1P20591 662 aa16.52■□□□□ 0.23
GTF2F1-201ENST00000394456 TEFQ10587 303 aa16.52■□□□□ 0.23
GTF2F1-201ENST00000394456 AKAP4Q5JQC9 854 aa16.52■□□□□ 0.23
GTF2F1-201ENST00000394456 CASC1Q6TDU7 716 aa16.52■□□□□ 0.23
GTF2F1-201ENST00000394456 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 ESYT1Q9BSJ8 1104 aa16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 ERBB3P21860 1342 aa16.51■□□□□ 0.23
GTF2F1-201ENST00000394456 REC8O95072 547 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 CADPS2Q86UW7 1296 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 ANO2Q9NQ90 1003 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 XIRP1Q702N8 1843 aaKnown RBP16.5■□□□□ 0.23
GTF2F1-201ENST00000394456 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 CHMLP26374 656 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 DCCP43146 1447 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 ST18O60284 1047 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 AMOTQ4VCS5 1084 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 NCAPD2Q15021 1401 aa16.49■□□□□ 0.23
GTF2F1-201ENST00000394456 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 CLEC17AQ6ZS10 378 aa16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 LARP6Q9BRS8 491 aaKnown RBP16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 SKOR2Q2VWA4 1001 aaPredicted RBP16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
GTF2F1-201ENST00000394456 GNAI3P08754 354 aa16.47■□□□□ 0.23
GTF2F1-201ENST00000394456 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
GTF2F1-201ENST00000394456 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
GTF2F1-201ENST00000394456 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
GTF2F1-201ENST00000394456 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
GTF2F1-201ENST00000394456 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
GTF2F1-201ENST00000394456 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.22
GTF2F1-201ENST00000394456 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.22
GTF2F1-201ENST00000394456 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.22
GTF2F1-201ENST00000394456 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
GTF2F1-201ENST00000394456 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
GTF2F1-201ENST00000394456 NUCB2P80303 420 aa16.45■□□□□ 0.22
GTF2F1-201ENST00000394456 STRCQ7RTU9 1775 aa16.45■□□□□ 0.22
GTF2F1-201ENST00000394456 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
GTF2F1-201ENST00000394456 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
GTF2F1-201ENST00000394456 PI4KAP2A4QPH2 592 aa16.44■□□□□ 0.22
GTF2F1-201ENST00000394456 ESPNB1AK53 854 aa16.44■□□□□ 0.22
GTF2F1-201ENST00000394456 PI4KAP1Q8N8J0 262 aa16.44■□□□□ 0.22
GTF2F1-201ENST00000394456 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
GTF2F1-201ENST00000394456 COL18A1P39060 1754 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 TPRNQ4KMQ1 711 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 CLCN1P35523 988 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 BRINP3Q76B58 766 aa16.43■□□□□ 0.22
GTF2F1-201ENST00000394456 SPATA31A3Q5VYP0 1347 aa16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 NAP1L5Q96NT1 182 aaPredicted RBP16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 STAP2Q9UGK3 403 aa16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
GTF2F1-201ENST00000394456 MEGF6O75095 1541 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 CPA1P15085 419 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 SRCIN1Q9C0H9 1055 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
GTF2F1-201ENST00000394456 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
GTF2F1-201ENST00000394456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.4■□□□□ 0.22
GTF2F1-201ENST00000394456 HOXB7P09629 217 aa16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 SLC39A6Q13433 755 aa16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 BEND3Q5T5X7 828 aa16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.22
GTF2F1-201ENST00000394456 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-201ENST00000394456 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-201ENST00000394456 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
GTF2F1-201ENST00000394456 TUBGCP6Q96RT7 1819 aa16.39■□□□□ 0.21
GTF2F1-201ENST00000394456 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-201ENST00000394456 POLA2Q14181 598 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms