RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 TEFQ10587 303 aa16.92■□□□□ 0.3
SRSF5-201ENST00000394366 ABCC4O15439 1325 aa16.91■□□□□ 0.3
SRSF5-201ENST00000394366 HOXB7P09629 217 aa16.91■□□□□ 0.3
SRSF5-201ENST00000394366 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
SRSF5-201ENST00000394366 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
SRSF5-201ENST00000394366 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
SRSF5-201ENST00000394366 CACNA1FO60840 1977 aa16.9■□□□□ 0.3
SRSF5-201ENST00000394366 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
SRSF5-201ENST00000394366 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
SRSF5-201ENST00000394366 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
SRSF5-201ENST00000394366 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
SRSF5-201ENST00000394366 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
SRSF5-201ENST00000394366 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
SRSF5-201ENST00000394366 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
SRSF5-201ENST00000394366 PIGBQ92521 554 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 DCAF5Q96JK2 942 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 TMOD3Q9NYL9 352 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
SRSF5-201ENST00000394366 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
SRSF5-201ENST00000394366 LGR6Q9HBX8 967 aa16.87■□□□□ 0.29
SRSF5-201ENST00000394366 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
SRSF5-201ENST00000394366 SIPA1L3O60292 1781 aaPredicted RBP16.86■□□□□ 0.29
SRSF5-201ENST00000394366 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
SRSF5-201ENST00000394366 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
SRSF5-201ENST00000394366 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
SRSF5-201ENST00000394366 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
SRSF5-201ENST00000394366 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
SRSF5-201ENST00000394366 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 KCNQ4P56696 695 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
SRSF5-201ENST00000394366 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 IGHDP01880 384 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 CABP4P57796 275 aa16.85■□□□□ 0.29
SRSF5-201ENST00000394366 INTS3Q68E01 1043 aaKnown RBP16.85■□□□□ 0.29
SRSF5-201ENST00000394366 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
SRSF5-201ENST00000394366 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
SRSF5-201ENST00000394366 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.29
SRSF5-201ENST00000394366 ZBTB7BO15156 539 aaPredicted RBP16.83■□□□□ 0.28
SRSF5-201ENST00000394366 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
SRSF5-201ENST00000394366 MRC1P22897 1456 aa16.82■□□□□ 0.28
SRSF5-201ENST00000394366 ITGB4P16144 1822 aa16.82■□□□□ 0.28
SRSF5-201ENST00000394366 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
SRSF5-201ENST00000394366 ZNF827Q17R98 1081 aa16.81■□□□□ 0.28
SRSF5-201ENST00000394366 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
SRSF5-201ENST00000394366 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
SRSF5-201ENST00000394366 LY75O60449 1722 aa16.81■□□□□ 0.28
SRSF5-201ENST00000394366 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
SRSF5-201ENST00000394366 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
SRSF5-201ENST00000394366 CCT4P50991 539 aaKnown RBP16.8■□□□□ 0.28
SRSF5-201ENST00000394366 NFATC2IPQ8NCF5 419 aa16.8■□□□□ 0.28
SRSF5-201ENST00000394366 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
SRSF5-201ENST00000394366 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
SRSF5-201ENST00000394366 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
SRSF5-201ENST00000394366 SIK1P57059 783 aa16.79■□□□□ 0.28
SRSF5-201ENST00000394366 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
SRSF5-201ENST00000394366 FLIIQ13045 1269 aa16.78■□□□□ 0.28
SRSF5-201ENST00000394366 PDGFDQ9GZP0 370 aaPredicted RBP16.78■□□□□ 0.28
SRSF5-201ENST00000394366 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
SRSF5-201ENST00000394366 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
SRSF5-201ENST00000394366 ATP6V1AP38606 617 aa16.77■□□□□ 0.27
SRSF5-201ENST00000394366 SPON1Q9HCB6 807 aa16.77■□□□□ 0.27
SRSF5-201ENST00000394366 FKBP5Q13451 457 aaPredicted RBP16.76■□□□□ 0.27
SRSF5-201ENST00000394366 SMC5Q8IY18 1101 aa16.76■□□□□ 0.27
SRSF5-201ENST00000394366 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
SRSF5-201ENST00000394366 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
SRSF5-201ENST00000394366 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
SRSF5-201ENST00000394366 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
SRSF5-201ENST00000394366 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
SRSF5-201ENST00000394366 LRP5O75197 1615 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 G2E3Q7L622 706 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
SRSF5-201ENST00000394366 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 PDE4AP27815 886 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 ITPK1Q13572 414 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 AK7Q96M32 723 aa16.74■□□□□ 0.27
SRSF5-201ENST00000394366 KCNQ3O43525 872 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
SRSF5-201ENST00000394366 RGS3P49796 1198 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
SRSF5-201ENST00000394366 TTC5Q8N0Z6 440 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
SRSF5-201ENST00000394366 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
SRSF5-201ENST00000394366 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
SRSF5-201ENST00000394366 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
SRSF5-201ENST00000394366 NECTIN2Q92692 538 aa16.72■□□□□ 0.27
SRSF5-201ENST00000394366 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
SRSF5-201ENST00000394366 MSH5O43196 834 aa16.71■□□□□ 0.27
SRSF5-201ENST00000394366 FAM161AQ3B820 660 aa16.71■□□□□ 0.27
SRSF5-201ENST00000394366 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
SRSF5-201ENST00000394366 C5P01031 1676 aa16.71■□□□□ 0.27
SRSF5-201ENST00000394366 GNAI3P08754 354 aa16.7■□□□□ 0.26
SRSF5-201ENST00000394366 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
SRSF5-201ENST00000394366 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms