RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PRPF40BQ6NWY9 871 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 TIGD1Q96MW7 591 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 ANKIB1Q9P2G1 1089 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 RANBP6O60518 1105 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 ALS2CR12Q96Q35 445 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 MROH2BQ7Z745 1585 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 FANCD2Q9BXW9 1451 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 NLRP5P59047 1200 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 TMEM266Q2M3C6 531 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 PPP4R3BQ5MIZ7 849 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 C16orf45Q96MC5 204 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 PRAM1Q96QH2 718 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 DAAM2Q86T65 1068 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 PROSER2Q86WR7 435 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 CNNM3Q8NE01 707 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 SMARCC1Q92922 1105 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 FEZ1Q99689 392 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 MCM4P33991 863 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 TXNDC2Q86VQ3 553 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 CKAP2LQ8IYA6 745 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 SYCP3Q8IZU3 236 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 CDK19Q9BWU1 502 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF219Q9P2Y4 722 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-206ENST00000394104 HSF2BPO75031 334 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 MVPQ14764 893 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 DZIP1Q86YF9 867 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 OTUD6BQ8N6M0 293 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 PNISRQ8TF01 805 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 TCERG1LQ5VWI1 586 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 SPECC1LQ69YQ0 1117 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF444Q8N0Y2 327 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 ZBTB9Q96C00 473 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 C8orf76Q96K31 380 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 CALCOCO1Q9P1Z2 691 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 BIN1O00499 593 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 CAVIN4Q5BKX8 364 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 NAA15Q9BXJ9 866 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC40Q4G0X9 1142 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 BOLA2Q9H3K6 86 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 ZSWIM4Q9H7M6 989 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 ZHX1Q9UKY1 873 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 IKBKGQ9Y6K9 419 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 KIF2AO00139 706 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 RAB3IL1Q8TBN0 382 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 EHMT1Q9H9B1 1298 aa6.56□□□□□ -1.36
GAPVD1-206ENST00000394104 PSMC4P43686 418 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 RRS1Q15050 365 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 MYO1BO43795 1136 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 BAG4O95429 457 aaKnown RBP6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 ZSCAN30Q86W11 494 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 CEP112Q8N8E3 955 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 BICD1Q96G01 975 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 NAPBQ9H115 298 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 U3KPZ7 1027 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 NAP1L3Q99457 506 aaPredicted RBP6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 MYD88Q99836 296 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 SAMM50Q9Y512 469 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 WIZO95785 1651 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 ATF7IPQ6VMQ6 1270 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 FBF1Q8TES7 1133 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC6Q16204 474 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 EXOC6BQ9Y2D4 811 aa6.55□□□□□ -1.36
GAPVD1-206ENST00000394104 A0A087WZG4 1122 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CALML4Q96GE6 196 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 BACH2Q9BYV9 841 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 PHAXQ9H814 394 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 ARHGAP5Q13017 1502 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 GOLGA8BA8MQT2 603 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 FSIP1Q8NA03 581 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CCDC63Q8NA47 563 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 RAB34Q9BZG1 259 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 SYNCQ9H7C4 482 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 PTPRGP23470 1445 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 POTEB2H3BUK9 544 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 IFIT1P09914 478 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 FERMT1Q9BQL6 677 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 PANK2Q9BZ23 570 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 ZPR1O75312 459 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 SNW1Q13573 536 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CTCFLQ8NI51 663 aaPredicted RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 USP25Q9UHP3 1055 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 FYCO1Q9BQS8 1478 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 ZNF213O14771 459 aa6.54□□□□□ -1.36
GAPVD1-206ENST00000394104 CEP135Q66GS9 1140 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms