RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 KIAA0232Q92628 1395 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 PTCH1Q13635 1447 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 POTEB2H3BUK9 544 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 TUBB4BP68371 445 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 STK38Q15208 465 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 TTC12Q9H892 705 aaPredicted RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 PIK3R4Q99570 1358 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 CCAR2Q8N163 923 aaKnown RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 MAP3K4Q9Y6R4 1608 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
GABRA1-202ENST00000393943 TRDNQ13061 729 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 TXLNBQ8N3L3 684 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 TTC41PQ6P2S7 1318 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 CHMLP26374 656 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 VPS53Q5VIR6 699 aa10.12□□□□□ -0.79
GABRA1-202ENST00000393943 ATL3Q6DD88 541 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 MPNDQ8N594 471 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 ABCC1P33527 1531 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 JAKMIP3Q5VZ66 844 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 NOL10Q9BSC4 688 aaKnown RBP10.11□□□□□ -0.79
GABRA1-202ENST00000393943 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 GDPD2Q9HCC8 539 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 CNPY2Q9Y2B0 182 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 RIMS2Q9UQ26 1411 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 IQGAP1P46940 1657 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 RGS12O14924 1447 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 ME1P48163 572 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 SAFBQ15424 915 aaKnown RBP eCLIP10.11□□□□□ -0.79
GABRA1-202ENST00000393943 SMARCE1Q969G3 411 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 PLEKHF1Q96S99 279 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 RAD50Q92878 1312 aa10.11□□□□□ -0.79
GABRA1-202ENST00000393943 SLU7O95391 586 aaKnown RBP10.1□□□□□ -0.79
GABRA1-202ENST00000393943 FLIIQ13045 1269 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 ERO1AQ96HE7 468 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 TYRO3Q06418 890 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 GIMAP6Q6P9H5 292 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 MEIS3Q99687 375 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 ECHDC1Q9NTX5 307 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 SPHKAPQ2M3C7 1700 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 GNAT3A8MTJ3 354 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 USP8P40818 1118 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 CUL4AQ13619 759 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 CCDC186Q7Z3E2 898 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 C8orf58Q8NAV2 365 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 FAM107BQ9H098 131 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 SETBP1Q9Y6X0 1596 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
GABRA1-202ENST00000393943 PRPF40BQ6NWY9 871 aaKnown RBP10.1□□□□□ -0.79
GABRA1-202ENST00000393943 GPT2Q8TD30 523 aa10.1□□□□□ -0.79
GABRA1-202ENST00000393943 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
GABRA1-202ENST00000393943 ARAP3Q8WWN8 1544 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 FILIP1LQ4L180 1135 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 RALYLQ86SE5 291 aaKnown RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 IL1RAPL2Q9NP60 686 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 SERPINC1P01008 464 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 V9GYY5 206 aaPredicted RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 VIRMAQ69YN4 1812 aaKnown RBP10.09□□□□□ -0.79
GABRA1-202ENST00000393943 MCM3P25205 808 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 DDIT3P35638 169 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 CFAP74Q9C0B2 1584 aa10.09□□□□□ -0.79
GABRA1-202ENST00000393943 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 LRRFIP2Q9Y608 721 aaKnown RBP10.08□□□□□ -0.8
GABRA1-202ENST00000393943 EDC4Q6P2E9 1401 aaKnown RBP10.08□□□□□ -0.8
GABRA1-202ENST00000393943 CAMK4Q16566 473 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 RIOK3O14730 519 aaKnown RBP10.08□□□□□ -0.8
GABRA1-202ENST00000393943 CDKL5O76039 1030 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 SYT1P21579 422 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 ANO6Q4KMQ2 910 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 CTR9Q6PD62 1173 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 AACSQ86V21 672 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 ZNF830Q96NB3 372 aaPredicted RBP10.08□□□□□ -0.8
GABRA1-202ENST00000393943 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 NEURL4Q96JN8 1562 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 IQSEC2Q5JU85 1478 aa10.08□□□□□ -0.8
GABRA1-202ENST00000393943 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
GABRA1-202ENST00000393943 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 MSH6P52701 1360 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 PLEKHO1Q53GL0 409 aaPredicted RBP10.07□□□□□ -0.8
GABRA1-202ENST00000393943 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms