RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 ADCY9O60503 1353 aa24.72■■□□□ 1.55
RAB5C-202ENST00000393860 DDX21Q9NR30 783 aaKnown RBP eCLIP24.71■■□□□ 1.55
RAB5C-202ENST00000393860 TMOD3Q9NYL9 352 aa24.71■■□□□ 1.55
RAB5C-202ENST00000393860 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
RAB5C-202ENST00000393860 LAMB4A4D0S4 1761 aa24.71■■□□□ 1.55
RAB5C-202ENST00000393860 TNS2Q63HR2 1409 aa24.71■■□□□ 1.55
RAB5C-202ENST00000393860 PTCD1O75127 700 aaKnown RBP24.71■■□□□ 1.55
RAB5C-202ENST00000393860 PDE4AP27815 886 aa24.71■■□□□ 1.55
RAB5C-202ENST00000393860 AIMP1Q12904 312 aaKnown RBP24.71■■□□□ 1.55
RAB5C-202ENST00000393860 SPATA31A5Q5VU36 1347 aa24.7■■□□□ 1.55
RAB5C-202ENST00000393860 SPATA31A7Q8IWB4 1347 aa24.7■■□□□ 1.55
RAB5C-202ENST00000393860 ITGB4P16144 1822 aa24.7■■□□□ 1.54
RAB5C-202ENST00000393860 DNAAF4Q8WXU2 420 aa24.7■■□□□ 1.54
RAB5C-202ENST00000393860 HYPKQ9NX55 129 aa24.7■■□□□ 1.54
RAB5C-202ENST00000393860 CEP85Q6P2H3 762 aa24.69■■□□□ 1.54
RAB5C-202ENST00000393860 NGLY1Q96IV0 654 aa24.69■■□□□ 1.54
RAB5C-202ENST00000393860 LRP6O75581 1613 aa24.68■■□□□ 1.54
RAB5C-202ENST00000393860 ANKRD44Q8N8A2 993 aa24.68■■□□□ 1.54
RAB5C-202ENST00000393860 MAP3K2Q9Y2U5 619 aa24.68■■□□□ 1.54
RAB5C-202ENST00000393860 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
RAB5C-202ENST00000393860 PIGBQ92521 554 aa24.67■■□□□ 1.54
RAB5C-202ENST00000393860 THRAP3Q9Y2W1 955 aaKnown RBP24.67■■□□□ 1.54
RAB5C-202ENST00000393860 HSPA1LP34931 641 aa24.66■■□□□ 1.54
RAB5C-202ENST00000393860 BEND3Q5T5X7 828 aa24.66■■□□□ 1.54
RAB5C-202ENST00000393860 UNC5CLQ8IV45 518 aa24.66■■□□□ 1.54
RAB5C-202ENST00000393860 DDB1Q16531 1140 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 ASAP1Q9ULH1 1129 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 GNAI2P04899 355 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 KSR2Q6VAB6 950 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 XAGE3Q8WTP9 111 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 SYTL4Q96C24 671 aaPredicted RBP24.65■■□□□ 1.54
RAB5C-202ENST00000393860 BACH2Q9BYV9 841 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 USP44Q9H0E7 712 aa24.65■■□□□ 1.54
RAB5C-202ENST00000393860 DOT1LQ8TEK3 1739 aa24.64■■□□□ 1.54
RAB5C-202ENST00000393860 NUCB1Q02818 461 aa24.64■■□□□ 1.53
RAB5C-202ENST00000393860 RPAP2Q8IXW5 612 aaPredicted RBP24.64■■□□□ 1.53
RAB5C-202ENST00000393860 CDCA7Q9BWT1 371 aaPredicted RBP24.64■■□□□ 1.53
RAB5C-202ENST00000393860 LNPKQ9C0E8 428 aa24.64■■□□□ 1.53
RAB5C-202ENST00000393860 KAT6BQ8WYB5 2073 aa24.64■■□□□ 1.53
RAB5C-202ENST00000393860 BCL9LQ86UU0 1499 aa24.64■■□□□ 1.53
RAB5C-202ENST00000393860 GNAI3P08754 354 aa24.63■■□□□ 1.53
RAB5C-202ENST00000393860 GCC1Q96CN9 775 aa24.63■■□□□ 1.53
RAB5C-202ENST00000393860 ANKRD45Q5TZF3 282 aa24.63■■□□□ 1.53
RAB5C-202ENST00000393860 COPS6Q7L5N1 327 aa24.63■■□□□ 1.53
RAB5C-202ENST00000393860 LRRFIP2Q9Y608 721 aaKnown RBP24.63■■□□□ 1.53
RAB5C-202ENST00000393860 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 A0A0G2JS52 829 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 DDX58O95786 925 aaKnown RBP24.61■■□□□ 1.53
RAB5C-202ENST00000393860 LRP10Q7Z4F1 713 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 CHD1LQ86WJ1 897 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 UBTFL1P0CB47 393 aaPredicted RBP24.61■■□□□ 1.53
RAB5C-202ENST00000393860 FAM98CQ17RN3 349 aaKnown RBP24.61■■□□□ 1.53
RAB5C-202ENST00000393860 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 ATG3Q9NT62 314 aa24.61■■□□□ 1.53
RAB5C-202ENST00000393860 CWF19L2Q2TBE0 894 aaKnown RBP24.6■■□□□ 1.53
RAB5C-202ENST00000393860 RIC3Q7Z5B4 369 aa24.6■■□□□ 1.53
RAB5C-202ENST00000393860 BCL9O00512 1426 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 A1BGP04217 495 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 BARGINQ6ZT62 677 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 MARCH10Q8NA82 808 aaPredicted RBP24.59■■□□□ 1.53
RAB5C-202ENST00000393860 NBPF26B4DH59 902 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 NBPF7P0C2Y1 421 aaPredicted RBP24.59■■□□□ 1.53
RAB5C-202ENST00000393860 PRIM1P49642 420 aaKnown RBP24.59■■□□□ 1.53
RAB5C-202ENST00000393860 C8orf34Q49A92 452 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 NBPF14Q5TI25 921 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 NBPF10Q6P3W6 841 aaKnown RBP24.59■■□□□ 1.53
RAB5C-202ENST00000393860 NBPF15Q8N660 670 aa24.59■■□□□ 1.53
RAB5C-202ENST00000393860 RBM42Q9BTD8 480 aaKnown RBP24.59■■□□□ 1.53
RAB5C-202ENST00000393860 ACSBG1Q96GR2 724 aa24.58■■□□□ 1.53
RAB5C-202ENST00000393860 DCTPP1Q9H773 170 aa24.58■■□□□ 1.53
RAB5C-202ENST00000393860 APBB1O00213 710 aa24.57■■□□□ 1.52
RAB5C-202ENST00000393860 VPS72Q15906 364 aa24.57■■□□□ 1.52
RAB5C-202ENST00000393860 MEX3CQ5U5Q3 659 aaKnown RBP24.57■■□□□ 1.52
RAB5C-202ENST00000393860 USP21Q9UK80 565 aa24.57■■□□□ 1.52
RAB5C-202ENST00000393860 PNMA6EA0A0J9YXQ4 647 aa24.56■■□□□ 1.52
RAB5C-202ENST00000393860 FNBP4Q8N3X1 1017 aaPredicted RBP24.56■■□□□ 1.52
RAB5C-202ENST00000393860 DNAJC10Q8IXB1 793 aa24.55■■□□□ 1.52
RAB5C-202ENST00000393860 HMMRO75330 724 aa24.55■■□□□ 1.52
RAB5C-202ENST00000393860 MYD88Q99836 296 aa24.55■■□□□ 1.52
RAB5C-202ENST00000393860 ARFGEF2Q9Y6D5 1785 aa24.54■■□□□ 1.52
RAB5C-202ENST00000393860 ALDH1L1O75891 902 aa24.54■■□□□ 1.52
RAB5C-202ENST00000393860 MYT1Q01538 1121 aa24.54■■□□□ 1.52
RAB5C-202ENST00000393860 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
RAB5C-202ENST00000393860 LINS1Q8NG48 757 aa24.53■■□□□ 1.52
RAB5C-202ENST00000393860 IGKV5-2P06315 115 aa24.53■■□□□ 1.52
RAB5C-202ENST00000393860 ATP8B2P98198 1209 aa24.53■■□□□ 1.52
RAB5C-202ENST00000393860 C9orf78Q9NZ63 289 aaPredicted RBP24.53■■□□□ 1.52
RAB5C-202ENST00000393860 ERBB4Q15303 1308 aa24.53■■□□□ 1.52
RAB5C-202ENST00000393860 SMARCA5O60264 1052 aaPredicted RBP24.52■■□□□ 1.52
RAB5C-202ENST00000393860 TTLL7Q6ZT98 887 aa24.52■■□□□ 1.52
RAB5C-202ENST00000393860 METTL22Q9BUU2 404 aaPredicted RBP24.51■■□□□ 1.51
RAB5C-202ENST00000393860 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.51■■□□□ 1.51
RAB5C-202ENST00000393860 NPM2Q86SE8 214 aaKnown RBP24.51■■□□□ 1.51
RAB5C-202ENST00000393860 SLC4A9Q96Q91 983 aa24.51■■□□□ 1.51
RAB5C-202ENST00000393860 EXOC6BQ9Y2D4 811 aa24.51■■□□□ 1.51
RAB5C-202ENST00000393860 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
RAB5C-202ENST00000393860 NEXNQ0ZGT2 675 aa24.5■■□□□ 1.51
RAB5C-202ENST00000393860 AFDNP55196 1824 aaKnown RBP24.5■■□□□ 1.51
RAB5C-202ENST00000393860 NEURL1BA8MQ27 555 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms