RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 SALL3Q9BXA9 1300 aa23.65■■□□□ 1.38
UBTF-203ENST00000393606 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
UBTF-203ENST00000393606 MARF1Q9Y4F3 1742 aaKnown RBP23.64■■□□□ 1.37
UBTF-203ENST00000393606 XRN1Q8IZH2 1706 aaKnown RBP23.63■■□□□ 1.37
UBTF-203ENST00000393606 PRPF40AO75400 957 aaKnown RBP23.63■■□□□ 1.37
UBTF-203ENST00000393606 NUCB2P80303 420 aa23.63■■□□□ 1.37
UBTF-203ENST00000393606 CCDC173Q0VFZ6 552 aa23.63■■□□□ 1.37
UBTF-203ENST00000393606 FAM208AQ9UK61 1670 aaKnown RBP23.63■■□□□ 1.37
UBTF-203ENST00000393606 LMBRD1Q9NUN5 540 aa23.62■■□□□ 1.37
UBTF-203ENST00000393606 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
UBTF-203ENST00000393606 CYP2E1P05181 493 aaPredicted RBP23.62■■□□□ 1.37
UBTF-203ENST00000393606 TMX3Q96JJ7 454 aa23.61■■□□□ 1.37
UBTF-203ENST00000393606 LARP6Q9BRS8 491 aaKnown RBP23.61■■□□□ 1.37
UBTF-203ENST00000393606 ZDHHC9Q9Y397 364 aa23.61■■□□□ 1.37
UBTF-203ENST00000393606 OS9Q13438 667 aaPredicted RBP23.61■■□□□ 1.37
UBTF-203ENST00000393606 TPRNQ4KMQ1 711 aa23.61■■□□□ 1.37
UBTF-203ENST00000393606 LTN1O94822 1766 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 DTNBO60941 627 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 PROSER3Q2NL68 480 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 ZSCAN23Q3MJ62 389 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 DNAAF4Q8WXU2 420 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 PPP1R9BQ96SB3 815 aa23.6■■□□□ 1.37
UBTF-203ENST00000393606 RHPN1Q8TCX5 695 aa23.59■■□□□ 1.37
UBTF-203ENST00000393606 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
UBTF-203ENST00000393606 SSH3Q8TE77 659 aa23.59■■□□□ 1.37
UBTF-203ENST00000393606 ANP32BQ92688 251 aaKnown RBP23.59■■□□□ 1.37
UBTF-203ENST00000393606 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
UBTF-203ENST00000393606 GCP02774 474 aa23.58■■□□□ 1.37
UBTF-203ENST00000393606 LRRC37A3O60309 1634 aa23.58■■□□□ 1.37
UBTF-203ENST00000393606 MCCP23508 829 aa23.57■■□□□ 1.36
UBTF-203ENST00000393606 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
UBTF-203ENST00000393606 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
UBTF-203ENST00000393606 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
UBTF-203ENST00000393606 CWF19L2Q2TBE0 894 aaKnown RBP23.57■■□□□ 1.36
UBTF-203ENST00000393606 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
UBTF-203ENST00000393606 A0A0U1RQG5 324 aaPredicted RBP23.56■■□□□ 1.36
UBTF-203ENST00000393606 ZNF445P59923 1031 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 ZC3H6P61129 1189 aaKnown RBP23.56■■□□□ 1.36
UBTF-203ENST00000393606 PLEKHO1Q53GL0 409 aaPredicted RBP23.56■■□□□ 1.36
UBTF-203ENST00000393606 PA2G4Q9UQ80 394 aaKnown RBP23.56■■□□□ 1.36
UBTF-203ENST00000393606 CEMIPQ8WUJ3 1361 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 GPT2Q8TD30 523 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 ANKRD24Q8TF21 1146 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 RBSNQ9H1K0 784 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 MAP3K2Q9Y2U5 619 aa23.56■■□□□ 1.36
UBTF-203ENST00000393606 CWC22Q9HCG8 908 aaKnown RBP23.55■■□□□ 1.36
UBTF-203ENST00000393606 STAP2Q9UGK3 403 aa23.55■■□□□ 1.36
UBTF-203ENST00000393606 PRIM1P49642 420 aaKnown RBP23.55■■□□□ 1.36
UBTF-203ENST00000393606 RBM10P98175 930 aaKnown RBP23.55■■□□□ 1.36
UBTF-203ENST00000393606 AKAP4Q5JQC9 854 aa23.55■■□□□ 1.36
UBTF-203ENST00000393606 CWC27Q6UX04 472 aaKnown RBP23.55■■□□□ 1.36
UBTF-203ENST00000393606 C9orf78Q9NZ63 289 aaPredicted RBP23.55■■□□□ 1.36
UBTF-203ENST00000393606 ZSCAN30Q86W11 494 aa23.54■■□□□ 1.36
UBTF-203ENST00000393606 KCNH5Q8NCM2 988 aa23.54■■□□□ 1.36
UBTF-203ENST00000393606 BABAM1Q9NWV8 329 aa23.54■■□□□ 1.36
UBTF-203ENST00000393606 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
UBTF-203ENST00000393606 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
UBTF-203ENST00000393606 DDX17Q92841 729 aaKnown RBP23.53■■□□□ 1.36
UBTF-203ENST00000393606 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
UBTF-203ENST00000393606 PI4K2BQ8TCG2 481 aa23.52■■□□□ 1.36
UBTF-203ENST00000393606 ADCY9O60503 1353 aa23.52■■□□□ 1.36
UBTF-203ENST00000393606 SLC39A6Q13433 755 aa23.52■■□□□ 1.36
UBTF-203ENST00000393606 POLA2Q14181 598 aa23.52■■□□□ 1.36
UBTF-203ENST00000393606 PXDNQ92626 1479 aa23.51■■□□□ 1.35
UBTF-203ENST00000393606 CPA1P15085 419 aa23.51■■□□□ 1.35
UBTF-203ENST00000393606 KIF1BPQ96EK5 621 aa23.51■■□□□ 1.35
UBTF-203ENST00000393606 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
UBTF-203ENST00000393606 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
UBTF-203ENST00000393606 MSNP26038 577 aaKnown RBP23.5■■□□□ 1.35
UBTF-203ENST00000393606 PIP4K2AP48426 406 aaPredicted RBP23.5■■□□□ 1.35
UBTF-203ENST00000393606 PDCL3Q9H2J4 239 aa23.5■■□□□ 1.35
UBTF-203ENST00000393606 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
UBTF-203ENST00000393606 GDPD2Q9HCC8 539 aa23.49■■□□□ 1.35
UBTF-203ENST00000393606 DBF4Q9UBU7 674 aaPredicted RBP23.49■■□□□ 1.35
UBTF-203ENST00000393606 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
UBTF-203ENST00000393606 ARID3AQ99856 593 aa23.49■■□□□ 1.35
UBTF-203ENST00000393606 NFAT5O94916 1531 aa23.49■■□□□ 1.35
UBTF-203ENST00000393606 MYL6BP14649 208 aa23.48■■□□□ 1.35
UBTF-203ENST00000393606 TMEM63CQ9P1W3 806 aa23.48■■□□□ 1.35
UBTF-203ENST00000393606 PRDM4Q9UKN5 801 aa23.48■■□□□ 1.35
UBTF-203ENST00000393606 GIGYF1O75420 1035 aaPredicted RBP23.48■■□□□ 1.35
UBTF-203ENST00000393606 JARID2Q92833 1246 aaPredicted RBP23.48■■□□□ 1.35
UBTF-203ENST00000393606 SYCE3A1L190 88 aa23.47■■□□□ 1.35
UBTF-203ENST00000393606 SIL1Q9H173 461 aa23.47■■□□□ 1.35
UBTF-203ENST00000393606 KRT28Q7Z3Y7 464 aa23.46■■□□□ 1.35
UBTF-203ENST00000393606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.46■■□□□ 1.35
UBTF-203ENST00000393606 RASEFQ8IZ41 740 aa23.46■■□□□ 1.35
UBTF-203ENST00000393606 CACNA1FO60840 1977 aa23.46■■□□□ 1.35
UBTF-203ENST00000393606 CNTROBQ8N137 903 aa23.46■■□□□ 1.35
UBTF-203ENST00000393606 PXDNLA1KZ92 1463 aa23.45■■□□□ 1.34
UBTF-203ENST00000393606 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
UBTF-203ENST00000393606 CHD2O14647 1828 aaKnown RBP23.45■■□□□ 1.34
UBTF-203ENST00000393606 TPM2P07951 284 aa23.45■■□□□ 1.34
UBTF-203ENST00000393606 AMOTQ4VCS5 1084 aa23.45■■□□□ 1.34
UBTF-203ENST00000393606 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
UBTF-203ENST00000393606 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
UBTF-203ENST00000393606 HSPA4P34932 840 aa23.44■■□□□ 1.34
UBTF-203ENST00000393606 SGSM2O43147 1006 aa23.43■■□□□ 1.34
UBTF-203ENST00000393606 CLASRPQ8N2M8 674 aaKnown RBP23.43■■□□□ 1.34
UBTF-203ENST00000393606 CABLES1Q8TDN4 633 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms