RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 WDR43Q15061 677 aaKnown RBP eCLIP30.61■■■□□ 2.49
HMGA2-202ENST00000393577 COL15A1P39059 1388 aa30.61■■■□□ 2.49
HMGA2-202ENST00000393577 CANXP27824 592 aaKnown RBP30.6■■■□□ 2.49
HMGA2-202ENST00000393577 TEX13AQ9BXU3 409 aaPredicted RBP30.6■■■□□ 2.49
HMGA2-202ENST00000393577 TAF7Q15545 349 aaPredicted RBP30.59■■■□□ 2.49
HMGA2-202ENST00000393577 THUMPD2Q9BTF0 503 aaKnown RBP30.58■■■□□ 2.49
HMGA2-202ENST00000393577 GPR162Q16538 588 aa30.57■■■□□ 2.48
HMGA2-202ENST00000393577 CCDC146Q8IYE0 955 aa30.57■■■□□ 2.48
HMGA2-202ENST00000393577 PELP1Q8IZL8 1130 aaKnown RBP30.57■■■□□ 2.48
HMGA2-202ENST00000393577 ZPR1O75312 459 aa30.56■■■□□ 2.48
HMGA2-202ENST00000393577 FKBP8Q14318 412 aa30.56■■■□□ 2.48
HMGA2-202ENST00000393577 KDM3BQ7LBC6 1761 aa30.56■■■□□ 2.48
HMGA2-202ENST00000393577 USPL1Q5W0Q7 1092 aa30.55■■■□□ 2.48
HMGA2-202ENST00000393577 MIS18AQ9NYP9 233 aa30.55■■■□□ 2.48
HMGA2-202ENST00000393577 RIPK4P57078 832 aa30.54■■■□□ 2.48
HMGA2-202ENST00000393577 PRAMEF22A3QJZ6 481 aa30.53■■■□□ 2.48
HMGA2-202ENST00000393577 ADAMTS8Q9UP79 889 aa30.53■■■□□ 2.48
HMGA2-202ENST00000393577 PARP3Q9Y6F1 533 aa30.53■■■□□ 2.48
HMGA2-202ENST00000393577 KIF13BQ9NQT8 1826 aa30.52■■■□□ 2.48
HMGA2-202ENST00000393577 UTRNP46939 3433 aa30.52■■■□□ 2.48
HMGA2-202ENST00000393577 A1BGP04217 495 aa30.52■■■□□ 2.48
HMGA2-202ENST00000393577 TMPOP42166 694 aaKnown RBP30.52■■■□□ 2.48
HMGA2-202ENST00000393577 EIF5P55010 431 aaKnown RBP30.52■■■□□ 2.48
HMGA2-202ENST00000393577 PNISRQ8TF01 805 aaKnown RBP30.52■■■□□ 2.48
HMGA2-202ENST00000393577 NARFQ9UHQ1 456 aa30.52■■■□□ 2.48
HMGA2-202ENST00000393577 SNRPA1P09661 255 aaKnown RBP30.51■■■□□ 2.47
HMGA2-202ENST00000393577 RUNDC1Q96C34 613 aa30.51■■■□□ 2.47
HMGA2-202ENST00000393577 ZNF330Q9Y3S2 320 aaPredicted RBP30.51■■■□□ 2.47
HMGA2-202ENST00000393577 USP16Q9Y5T5 823 aa30.51■■■□□ 2.47
HMGA2-202ENST00000393577 YY1P25490 414 aa30.5■■■□□ 2.47
HMGA2-202ENST00000393577 RRP7AQ9Y3A4 280 aaKnown RBP30.5■■■□□ 2.47
HMGA2-202ENST00000393577 GOLGB1Q14789 3259 aaKnown RBP30.49■■■□□ 2.47
HMGA2-202ENST00000393577 C10orf71Q711Q0 1435 aa30.49■■■□□ 2.47
HMGA2-202ENST00000393577 A0A087WZG4 1122 aa30.48■■■□□ 2.47
HMGA2-202ENST00000393577 IL6STP40189 918 aaPredicted RBP30.48■■■□□ 2.47
HMGA2-202ENST00000393577 DDR1Q08345 913 aa30.48■■■□□ 2.47
HMGA2-202ENST00000393577 LMOD3Q0VAK6 560 aa30.48■■■□□ 2.47
HMGA2-202ENST00000393577 CHD4Q14839 1912 aa30.47■■■□□ 2.47
HMGA2-202ENST00000393577 LAMB4A4D0S4 1761 aa30.47■■■□□ 2.47
HMGA2-202ENST00000393577 YBX3P16989 372 aaKnown RBP eCLIP30.47■■■□□ 2.47
HMGA2-202ENST00000393577 NEUROD2Q15784 382 aa30.47■■■□□ 2.47
HMGA2-202ENST00000393577 SCN7AQ01118 1682 aa30.46■■■□□ 2.47
HMGA2-202ENST00000393577 BCL2L12Q9HB09 334 aa30.46■■■□□ 2.47
HMGA2-202ENST00000393577 KIAA1551Q9HCM1 1747 aa30.46■■■□□ 2.47
HMGA2-202ENST00000393577 TM4SF1P30408 202 aa30.45■■■□□ 2.47
HMGA2-202ENST00000393577 PIP4K2AP48426 406 aaPredicted RBP30.45■■■□□ 2.47
HMGA2-202ENST00000393577 N4BP2Q86UW6 1770 aaPredicted RBP30.45■■■□□ 2.46
HMGA2-202ENST00000393577 POLRMTO00411 1230 aaKnown RBP30.44■■■□□ 2.46
HMGA2-202ENST00000393577 NPM2Q86SE8 214 aaKnown RBP30.44■■■□□ 2.46
HMGA2-202ENST00000393577 WWC3Q9ULE0 1092 aa30.44■■■□□ 2.46
HMGA2-202ENST00000393577 PXDNLA1KZ92 1463 aa30.44■■■□□ 2.46
HMGA2-202ENST00000393577 TBC1D2BQ9UPU7 963 aa30.43■■■□□ 2.46
HMGA2-202ENST00000393577 EIF4A1P60842 406 aaKnown RBP30.42■■■□□ 2.46
HMGA2-202ENST00000393577 NFIXQ14938 502 aa30.42■■■□□ 2.46
HMGA2-202ENST00000393577 TSPYL4Q9UJ04 414 aa30.42■■■□□ 2.46
HMGA2-202ENST00000393577 AFDNP55196 1824 aaKnown RBP30.41■■■□□ 2.46
HMGA2-202ENST00000393577 CCDC184Q52MB2 194 aa30.41■■■□□ 2.46
HMGA2-202ENST00000393577 TGFB2P61812 414 aa30.4■■■□□ 2.46
HMGA2-202ENST00000393577 BCORQ6W2J9 1755 aa30.4■■■□□ 2.46
HMGA2-202ENST00000393577 ANP32CO43423 234 aa30.39■■■□□ 2.46
HMGA2-202ENST00000393577 GRIN3BO60391 1043 aa30.39■■■□□ 2.46
HMGA2-202ENST00000393577 GIGYF1O75420 1035 aaPredicted RBP30.39■■■□□ 2.46
HMGA2-202ENST00000393577 DZIP3Q86Y13 1208 aaKnown RBP30.38■■■□□ 2.45
HMGA2-202ENST00000393577 TRIM35Q9UPQ4 493 aa30.38■■■□□ 2.45
HMGA2-202ENST00000393577 NRXN2Q9P2S2 1712 aa30.37■■■□□ 2.45
HMGA2-202ENST00000393577 A0A0G2JLW4 131 aa30.37■■■□□ 2.45
HMGA2-202ENST00000393577 NBPF26B4DH59 902 aa30.37■■■□□ 2.45
HMGA2-202ENST00000393577 NBPF10Q6P3W6 841 aaKnown RBP30.37■■■□□ 2.45
HMGA2-202ENST00000393577 BICDL1Q6ZP65 573 aa30.37■■■□□ 2.45
HMGA2-202ENST00000393577 NBPF15Q8N660 670 aa30.37■■■□□ 2.45
HMGA2-202ENST00000393577 CAMTA2O94983 1202 aa30.36■■■□□ 2.45
HMGA2-202ENST00000393577 DPEP1P16444 411 aa30.35■■■□□ 2.45
HMGA2-202ENST00000393577 TBC1D9BQ66K14 1250 aa30.35■■■□□ 2.45
HMGA2-202ENST00000393577 SERPINB2P05120 415 aa30.34■■■□□ 2.45
HMGA2-202ENST00000393577 BABAM1Q9NWV8 329 aa30.34■■■□□ 2.45
HMGA2-202ENST00000393577 BRCA1P38398 1863 aaKnown RBP30.33■■■□□ 2.45
HMGA2-202ENST00000393577 APAF1O14727 1248 aa30.32■■■□□ 2.44
HMGA2-202ENST00000393577 LAS1LQ9Y4W2 734 aaKnown RBP30.31■■■□□ 2.44
HMGA2-202ENST00000393577 MRS2Q9HD23 443 aa30.29■■■□□ 2.44
HMGA2-202ENST00000393577 CARMIL3Q8ND23 1372 aa30.28■■■□□ 2.44
HMGA2-202ENST00000393577 BCS1LQ9Y276 419 aa30.28■■■□□ 2.44
HMGA2-202ENST00000393577 CHL1O00533 1208 aa30.27■■■□□ 2.44
HMGA2-202ENST00000393577 KCNA3P22001 575 aa30.27■■■□□ 2.44
HMGA2-202ENST00000393577 CHRNA5P30532 468 aa30.27■■■□□ 2.44
HMGA2-202ENST00000393577 NGEFQ8N5V2 710 aa30.26■■■□□ 2.43
HMGA2-202ENST00000393577 SETDB2Q96T68 719 aa30.26■■■□□ 2.43
HMGA2-202ENST00000393577 ZNF652Q9Y2D9 606 aa30.26■■■□□ 2.43
HMGA2-202ENST00000393577 MYL6BP14649 208 aa30.25■■■□□ 2.43
HMGA2-202ENST00000393577 EIF2S2P20042 333 aaKnown RBP30.24■■■□□ 2.43
HMGA2-202ENST00000393577 CLEC4GQ6UXB4 293 aa30.24■■■□□ 2.43
HMGA2-202ENST00000393577 PIM2Q9P1W9 311 aa30.23■■■□□ 2.43
HMGA2-202ENST00000393577 ANKRD31Q8N7Z5 1873 aa30.23■■■□□ 2.43
HMGA2-202ENST00000393577 ERBB4Q15303 1308 aa30.22■■■□□ 2.43
HMGA2-202ENST00000393577 KRT24Q2M2I5 525 aa30.22■■■□□ 2.43
HMGA2-202ENST00000393577 ARFGEF1Q9Y6D6 1849 aa30.22■■■□□ 2.43
HMGA2-202ENST00000393577 DLEC1Q9Y238 1755 aa30.21■■■□□ 2.43
HMGA2-202ENST00000393577 PRR5LQ6MZQ0 368 aa30.21■■■□□ 2.43
HMGA2-202ENST00000393577 ZNF784Q8NCA9 323 aaPredicted RBP30.21■■■□□ 2.43
HMGA2-202ENST00000393577 CFAP44Q96MT7 982 aa30.21■■■□□ 2.43
HMGA2-202ENST00000393577 CCDC24Q8N4L8 307 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms