RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 WWC3Q9ULE0 1092 aa18.47■□□□□ 0.55
CCDC57-204ENST00000392345 PRAMEF22A3QJZ6 481 aa18.46■□□□□ 0.55
CCDC57-204ENST00000392345 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
CCDC57-204ENST00000392345 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
CCDC57-204ENST00000392345 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
CCDC57-204ENST00000392345 C10orf71Q711Q0 1435 aa18.46■□□□□ 0.55
CCDC57-204ENST00000392345 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
CCDC57-204ENST00000392345 DDR1Q08345 913 aa18.45■□□□□ 0.54
CCDC57-204ENST00000392345 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
CCDC57-204ENST00000392345 MAPK8IP3Q9UPT6 1336 aa18.45■□□□□ 0.54
CCDC57-204ENST00000392345 STARD3NLO95772 234 aa18.44■□□□□ 0.54
CCDC57-204ENST00000392345 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
CCDC57-204ENST00000392345 DLG5Q8TDM6 1919 aa18.44■□□□□ 0.54
CCDC57-204ENST00000392345 NEFMP07197 916 aa18.43■□□□□ 0.54
CCDC57-204ENST00000392345 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
CCDC57-204ENST00000392345 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
CCDC57-204ENST00000392345 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
CCDC57-204ENST00000392345 A1BGP04217 495 aa18.42■□□□□ 0.54
CCDC57-204ENST00000392345 PIP4K2AP48426 406 aaPredicted RBP18.42■□□□□ 0.54
CCDC57-204ENST00000392345 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
CCDC57-204ENST00000392345 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
CCDC57-204ENST00000392345 ZPR1O75312 459 aa18.41■□□□□ 0.54
CCDC57-204ENST00000392345 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CCDC57-204ENST00000392345 NARFQ9UHQ1 456 aa18.41■□□□□ 0.54
CCDC57-204ENST00000392345 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
CCDC57-204ENST00000392345 RRP7AQ9Y3A4 280 aaKnown RBP18.4■□□□□ 0.54
CCDC57-204ENST00000392345 ZNF330Q9Y3S2 320 aaPredicted RBP18.4■□□□□ 0.54
CCDC57-204ENST00000392345 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
CCDC57-204ENST00000392345 POLRMTO00411 1230 aaKnown RBP18.39■□□□□ 0.53
CCDC57-204ENST00000392345 TM4SF1P30408 202 aa18.39■□□□□ 0.53
CCDC57-204ENST00000392345 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
CCDC57-204ENST00000392345 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
CCDC57-204ENST00000392345 KDM3BQ7LBC6 1761 aa18.39■□□□□ 0.53
CCDC57-204ENST00000392345 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.53
CCDC57-204ENST00000392345 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
CCDC57-204ENST00000392345 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
CCDC57-204ENST00000392345 NFIXQ14938 502 aa18.38■□□□□ 0.53
CCDC57-204ENST00000392345 WDR43Q15061 677 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC57-204ENST00000392345 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
CCDC57-204ENST00000392345 SNRPA1P09661 255 aaKnown RBP18.37■□□□□ 0.53
CCDC57-204ENST00000392345 IL6STP40189 918 aaPredicted RBP18.37■□□□□ 0.53
CCDC57-204ENST00000392345 RIPK4P57078 832 aa18.37■□□□□ 0.53
CCDC57-204ENST00000392345 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
CCDC57-204ENST00000392345 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
CCDC57-204ENST00000392345 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-204ENST00000392345 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
CCDC57-204ENST00000392345 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-204ENST00000392345 NBPF26B4DH59 902 aa18.35■□□□□ 0.53
CCDC57-204ENST00000392345 DPEP1P16444 411 aa18.35■□□□□ 0.53
CCDC57-204ENST00000392345 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
CCDC57-204ENST00000392345 NBPF10Q6P3W6 841 aaKnown RBP18.35■□□□□ 0.53
CCDC57-204ENST00000392345 NBPF15Q8N660 670 aa18.35■□□□□ 0.53
CCDC57-204ENST00000392345 A0A087WZG4 1122 aa18.34■□□□□ 0.53
CCDC57-204ENST00000392345 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
CCDC57-204ENST00000392345 EIF4A1P60842 406 aaKnown RBP18.34■□□□□ 0.53
CCDC57-204ENST00000392345 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
CCDC57-204ENST00000392345 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
CCDC57-204ENST00000392345 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.53
CCDC57-204ENST00000392345 GRIN3BO60391 1043 aa18.33■□□□□ 0.52
CCDC57-204ENST00000392345 KCNA3P22001 575 aa18.33■□□□□ 0.52
CCDC57-204ENST00000392345 TGFB2P61812 414 aa18.33■□□□□ 0.52
CCDC57-204ENST00000392345 TBC1D9BQ66K14 1250 aa18.33■□□□□ 0.52
CCDC57-204ENST00000392345 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
CCDC57-204ENST00000392345 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
CCDC57-204ENST00000392345 GIGYF1O75420 1035 aaPredicted RBP18.32■□□□□ 0.52
CCDC57-204ENST00000392345 CHRNA5P30532 468 aa18.32■□□□□ 0.52
CCDC57-204ENST00000392345 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
CCDC57-204ENST00000392345 BCORQ6W2J9 1755 aa18.32■□□□□ 0.52
CCDC57-204ENST00000392345 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
CCDC57-204ENST00000392345 SERPINB2P05120 415 aa18.31■□□□□ 0.52
CCDC57-204ENST00000392345 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
CCDC57-204ENST00000392345 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
CCDC57-204ENST00000392345 TSPYL4Q9UJ04 414 aa18.31■□□□□ 0.52
CCDC57-204ENST00000392345 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
CCDC57-204ENST00000392345 CHD4Q14839 1912 aa18.3■□□□□ 0.52
CCDC57-204ENST00000392345 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
CCDC57-204ENST00000392345 BCS1LQ9Y276 419 aa18.3■□□□□ 0.52
CCDC57-204ENST00000392345 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
CCDC57-204ENST00000392345 BRCA1P38398 1863 aaKnown RBP18.28■□□□□ 0.52
CCDC57-204ENST00000392345 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
CCDC57-204ENST00000392345 APAF1O14727 1248 aa18.26■□□□□ 0.51
CCDC57-204ENST00000392345 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
CCDC57-204ENST00000392345 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
CCDC57-204ENST00000392345 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
CCDC57-204ENST00000392345 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
CCDC57-204ENST00000392345 HLFQ16534 295 aa18.24■□□□□ 0.51
CCDC57-204ENST00000392345 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
CCDC57-204ENST00000392345 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
CCDC57-204ENST00000392345 ADCY9O60503 1353 aa18.24■□□□□ 0.51
CCDC57-204ENST00000392345 CHL1O00533 1208 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 MYL6BP14649 208 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 SETDB2Q96T68 719 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
CCDC57-204ENST00000392345 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
CCDC57-204ENST00000392345 ANXA1P04083 346 aa18.22■□□□□ 0.51
CCDC57-204ENST00000392345 EIF2S2P20042 333 aaKnown RBP18.22■□□□□ 0.51
CCDC57-204ENST00000392345 DALRD3Q5D0E6 543 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms