RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 SIPA1L3O60292 1781 aaPredicted RBP24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 F6X3S4 739 aa24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 HSP90AB1P08238 724 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 CABP4P57796 275 aa24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 KAT6BQ8WYB5 2073 aa24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 TNS2Q63HR2 1409 aa24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 GLI3P10071 1580 aa24.8■■□□□ 1.56
CSNK1D-203ENST00000392334 NKX1-1Q15270 411 aaPredicted RBP24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 ZNF790Q6PG37 636 aa24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 RTN4Q9NQC3 1192 aaKnown RBP24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 A0A0G2JS52 829 aa24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 QTRT2Q9H974 415 aaKnown RBP24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 ZBTB40Q9NUA8 1239 aa24.79■■□□□ 1.56
CSNK1D-203ENST00000392334 SMC5Q8IY18 1101 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 TRPC5Q9UL62 973 aaPredicted RBP24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 KDM3BQ7LBC6 1761 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 ATRNO75882 1429 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 ANXA1P04083 346 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 SLC4A10Q6U841 1118 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 C1orf115Q9H7X2 142 aa24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 PHAXQ9H814 394 aaKnown RBP24.78■■□□□ 1.56
CSNK1D-203ENST00000392334 PTPRCP08575 1304 aa24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 RGS12O14924 1447 aa24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 ZBTB7BO15156 539 aaPredicted RBP24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 GIGYF1O75420 1035 aaPredicted RBP24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 FLIIQ13045 1269 aa24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 CHPF2Q9P2E5 772 aa24.77■■□□□ 1.56
CSNK1D-203ENST00000392334 FKBP5Q13451 457 aaPredicted RBP24.76■■□□□ 1.55
CSNK1D-203ENST00000392334 SLKQ9H2G2 1235 aaPredicted RBP24.76■■□□□ 1.55
CSNK1D-203ENST00000392334 TOGARAM1Q9Y4F4 1720 aa24.76■■□□□ 1.55
CSNK1D-203ENST00000392334 MARCH10Q8NA82 808 aaPredicted RBP24.75■■□□□ 1.55
CSNK1D-203ENST00000392334 SOS1Q07889 1333 aaPredicted RBP24.74■■□□□ 1.55
CSNK1D-203ENST00000392334 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
CSNK1D-203ENST00000392334 ZNF496Q96IT1 587 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-203ENST00000392334 MRC1P22897 1456 aa24.73■■□□□ 1.55
CSNK1D-203ENST00000392334 EP400Q96L91 3159 aa24.73■■□□□ 1.55
CSNK1D-203ENST00000392334 HOXB7P09629 217 aa24.72■■□□□ 1.55
CSNK1D-203ENST00000392334 C22orf23Q9BZE7 217 aa24.72■■□□□ 1.55
CSNK1D-203ENST00000392334 ERVV-2B6SEH9 535 aa24.71■■□□□ 1.55
CSNK1D-203ENST00000392334 INTS3Q68E01 1043 aaKnown RBP24.71■■□□□ 1.55
CSNK1D-203ENST00000392334 HEG1Q9ULI3 1381 aa24.7■■□□□ 1.54
CSNK1D-203ENST00000392334 THSD7AQ9UPZ6 1657 aa24.7■■□□□ 1.54
CSNK1D-203ENST00000392334 PROSER3Q2NL68 480 aa24.7■■□□□ 1.54
CSNK1D-203ENST00000392334 ITGB4P16144 1822 aa24.69■■□□□ 1.54
CSNK1D-203ENST00000392334 FAM182BQ5T319 152 aa24.68■■□□□ 1.54
CSNK1D-203ENST00000392334 L1TD1Q5T7N2 865 aaKnown RBP24.68■■□□□ 1.54
CSNK1D-203ENST00000392334 SYTL4Q96C24 671 aaPredicted RBP24.68■■□□□ 1.54
CSNK1D-203ENST00000392334 ONECUT3O60422 494 aaPredicted RBP24.67■■□□□ 1.54
CSNK1D-203ENST00000392334 DOT1LQ8TEK3 1739 aa24.67■■□□□ 1.54
CSNK1D-203ENST00000392334 ZNF772Q68DY9 489 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 SEPT12Q8IYM1 358 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 FAM43AQ8N2R8 423 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 ACSBG1Q96GR2 724 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 TMOD3Q9NYL9 352 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 DBF4Q9UBU7 674 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 USP16Q9Y5T5 823 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 PIP4K2AP48426 406 aaPredicted RBP24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 NUCB1Q02818 461 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 PIGBQ92521 554 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 MEIS3Q99687 375 aa24.66■■□□□ 1.54
CSNK1D-203ENST00000392334 PTCD1O75127 700 aaKnown RBP24.65■■□□□ 1.54
CSNK1D-203ENST00000392334 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
CSNK1D-203ENST00000392334 FMNL2Q96PY5 1086 aa24.65■■□□□ 1.54
CSNK1D-203ENST00000392334 CHMP5Q9NZZ3 219 aa24.65■■□□□ 1.54
CSNK1D-203ENST00000392334 MYL6BP14649 208 aa24.64■■□□□ 1.53
CSNK1D-203ENST00000392334 MFAP1P55081 439 aaKnown RBP24.64■■□□□ 1.53
CSNK1D-203ENST00000392334 CHMP4BQ9H444 224 aaKnown RBP24.64■■□□□ 1.53
CSNK1D-203ENST00000392334 SNRPA1P09661 255 aaKnown RBP24.63■■□□□ 1.53
CSNK1D-203ENST00000392334 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
CSNK1D-203ENST00000392334 PI4KAP2A4QPH2 592 aa24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 AIMP1Q12904 312 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 PI4KAP1Q8N8J0 262 aa24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 CHMP4AQ9BY43 222 aa24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 ANO8Q9HCE9 1232 aaPredicted RBP24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 MCM4P33991 863 aa24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 RBM25P49756 843 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 CCT4P50991 539 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
CSNK1D-203ENST00000392334 KCNQ2O43526 872 aa24.61■■□□□ 1.53
CSNK1D-203ENST00000392334 PDIA6Q15084 440 aa24.61■■□□□ 1.53
CSNK1D-203ENST00000392334 SIRT2Q8IXJ6 389 aa24.61■■□□□ 1.53
CSNK1D-203ENST00000392334 BCL9O00512 1426 aa24.6■■□□□ 1.53
CSNK1D-203ENST00000392334 SNX21Q969T3 373 aa24.59■■□□□ 1.53
CSNK1D-203ENST00000392334 PAPPAQ13219 1627 aa24.58■■□□□ 1.53
CSNK1D-203ENST00000392334 RBM6P78332 1123 aaKnown RBP24.58■■□□□ 1.53
CSNK1D-203ENST00000392334 DDX21Q9NR30 783 aaKnown RBP eCLIP24.58■■□□□ 1.536e-8■■□□□ 13.9
CSNK1D-203ENST00000392334 ATG3Q9NT62 314 aa24.58■■□□□ 1.53
CSNK1D-203ENST00000392334 C5P01031 1676 aa24.58■■□□□ 1.52
CSNK1D-203ENST00000392334 BRWD3Q6RI45 1802 aa24.58■■□□□ 1.52
CSNK1D-203ENST00000392334 HSCBQ8IWL3 235 aa24.57■■□□□ 1.52
CSNK1D-203ENST00000392334 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
CSNK1D-203ENST00000392334 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
CSNK1D-203ENST00000392334 HYPKQ9NX55 129 aa24.57■■□□□ 1.52
CSNK1D-203ENST00000392334 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
CSNK1D-203ENST00000392334 DNAAF4Q8WXU2 420 aa24.56■■□□□ 1.52
CSNK1D-203ENST00000392334 FSD2A1L4K1 749 aa24.56■■□□□ 1.52
CSNK1D-203ENST00000392334 BMP2KLQ5H9B9 411 aa24.56■■□□□ 1.52
CSNK1D-203ENST00000392334 POTEAQ6S8J7 498 aa24.56■■□□□ 1.52
CSNK1D-203ENST00000392334 MAP3K2Q9Y2U5 619 aa24.56■■□□□ 1.52
CSNK1D-203ENST00000392334 KCPQ6ZWJ8 1503 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms