RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 TRIM46Q7Z4K8 759 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 CCDC125Q86Z20 511 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 GLYCTKQ8IVS8 523 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 LINC00528Q8N1L1 170 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 HSH2DQ96JZ2 352 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 ESF1Q9H501 851 aaKnown RBP3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 KLK14Q9P0G3 267 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 EGFL7Q9UHF1 273 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 BCS1LQ9Y276 419 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 HCN4Q9Y3Q4 1203 aa3.02□□□□□ -1.93
TRAJ41-201ENST00000390496 SOBPA7XYQ1 873 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 FZD6O60353 706 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 RHOQP17081 205 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 ATP4AP20648 1035 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 MAPK1P28482 360 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PHKA2P46019 1235 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 MARSP56192 900 aaKnown RBP3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PSMA6P60900 246 aaKnown RBP3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PRR20EP86478 221 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PRR20CP86479 221 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PRR20DP86480 221 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PRR20BP86481 221 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PRR20AP86496 221 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 DGKZQ13574 1117 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 C4orf17Q53FE4 359 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 ESCO1Q5FWF5 840 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 C16orf46Q6P387 395 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 ETFBKMTQ8IXQ9 262 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 RNF217Q8TC41 542 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 SETDB2Q96T68 719 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 PHACTR1Q9C0D0 580 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 POLMQ9NP87 494 aaPredicted RBP3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 RNF19AQ9NV58 838 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 CCDC87Q9NVE4 849 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 CABP1Q9NZU7 370 aa3.01□□□□□ -1.93
TRAJ41-201ENST00000390496 SERTM1A2A2V5 107 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 ANKRD33BA6NCL7 494 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 FAM187AA6NFU0 413 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 A6NHS1 94 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 CDK2AP1O14519 115 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 GPR182O15218 404 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 ST8SIA5O15466 376 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 CAPN5O15484 640 aaPredicted RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 SPINT1O43278 529 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 PTCD1O75127 700 aaKnown RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 IGHA2P01877 340 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 GRNP28799 593 aaKnown RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 NOS2P35228 1153 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 EIF1AXP47813 144 aaKnown RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 TEAD4Q15561 434 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 FBXO33Q7Z6M2 555 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 PPARGC1BQ86YN6 1023 aaKnown RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 ALDH16A1Q8IZ83 802 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 ZNF280CQ8ND82 737 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 L3MBTL2Q969R5 705 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 COL26A1Q96A83 441 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 ZSCAN10Q96SZ4 725 aaPredicted RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 GRIP2Q9C0E4 1043 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 KIAA1522Q9P206 1035 aaPredicted RBP3□□□□□ -1.93
TRAJ41-201ENST00000390496 DACH1Q9UI36 760 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 ZNF232Q9UNY5 417 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 PDZRN3Q9UPQ7 1066 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 USP20Q9Y2K6 914 aa3□□□□□ -1.93
TRAJ41-201ENST00000390496 FIGNL2A6NMB9 653 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 P4HBP07237 508 aaKnown RBP2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 THBS1P07996 1170 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 NPR3P17342 541 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 HIRAP54198 1017 aaPredicted RBP2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 FKBP4Q02790 459 aaKnown RBP eCLIP2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 POU4F2Q12837 409 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 TMEM214Q6NUQ4 689 aaKnown RBP2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 MRPL14Q6P1L8 145 aaKnown RBP2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 PRICKLE2Q7Z3G6 844 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 TMC7Q7Z402 723 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 STAG2Q8N3U4 1231 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 RHBDD1Q8TEB9 315 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 GIPC2Q8TF65 315 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 C7orf43Q8WVR3 580 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 VTI1AQ96AJ9 217 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 MYO19Q96H55 970 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 NLRP3Q96P20 1036 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 DNMT3LQ9UJW3 386 aa2.99□□□□□ -1.93
TRAJ41-201ENST00000390496 LCE2BO14633 110 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 BMP2P12643 396 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 ZNF16P17020 682 aaPredicted RBP2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 RNF144AP50876 292 aaPredicted RBP2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 SF3B2Q13435 895 aaKnown RBP2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 RTN1Q16799 776 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 SLC27A3Q5K4L6 730 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 NBPF10Q6P3W6 841 aaKnown RBP2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 NBPF15Q8N660 670 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 EDEM1Q92611 657 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 ASB16Q96NS5 453 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 GPAMQ9HCL2 828 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 DCTN4Q9UJW0 460 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 HCN2Q9UL51 889 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 POLIQ9UNA4 740 aa2.98□□□□□ -1.93
TRAJ41-201ENST00000390496 SENP3-EIF4A1A0A087X0R7 540 aa2.97□□□□□ -1.93
TRAJ41-201ENST00000390496 SPATA31C2B4DYI2 1134 aa2.97□□□□□ -1.93
TRAJ41-201ENST00000390496 AVPP01185 164 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms