RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 CCDC88AQ3V6T2 1871 aa9.57□□□□□ -0.88
TRAV38-1-201ENST00000390464 LAMB4A4D0S4 1761 aa9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 RNMTO43148 476 aaKnown RBP9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 KCPQ6ZWJ8 1503 aa9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 C10orf71Q711Q0 1435 aa9.56□□□□□ -0.88
TRAV38-1-201ENST00000390464 GOLGB1Q14789 3259 aaKnown RBP9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 TGFB2P61812 414 aa9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 MTHFSDQ2M296 383 aaKnown RBP9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 AMIGO3Q86WK7 504 aa9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 RTF1Q92541 710 aaKnown RBP9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
TRAV38-1-201ENST00000390464 PXDNLA1KZ92 1463 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 COL15A1P39059 1388 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 UTRNP46939 3433 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 SBF1O95248 1867 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 STARD3NLO95772 234 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 GYS1P13807 737 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 U2AF1Q01081 240 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 SLC4A9Q96Q91 983 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 GPBP1L1Q9HC44 474 aaPredicted RBP9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 BCS1LQ9Y276 419 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 ATP10DQ9P241 1426 aa9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 USP42Q9H9J4 1324 aaKnown RBP9.54□□□□□ -0.88
TRAV38-1-201ENST00000390464 A0A087WZG4 1122 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 NPHP1O15259 732 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 SLC39A6Q13433 755 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 TEX13AQ9BXU3 409 aaPredicted RBP9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 LGR6Q9HBX8 967 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 NRXN2Q9P2S2 1712 aa9.53□□□□□ -0.88
TRAV38-1-201ENST00000390464 FCHSD2O94868 740 aa9.52□□□□□ -0.89
TRAV38-1-201ENST00000390464 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
TRAV38-1-201ENST00000390464 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
TRAV38-1-201ENST00000390464 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 CANXP27824 592 aaKnown RBP9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 PPP2R1AP30153 589 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 C1QTNF8P60827 252 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 PNNQ9H307 717 aaKnown RBP9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 SOS1Q07889 1333 aaPredicted RBP9.51□□□□□ -0.89
TRAV38-1-201ENST00000390464 HEG1Q9ULI3 1381 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 KDM3BQ7LBC6 1761 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 BTBD11A6QL63 1104 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 CYP19A1P11511 503 aaPredicted RBP9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 USPL1Q5W0Q7 1092 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 INTS5Q6P9B9 1019 aaKnown RBP9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 ZNF790Q6PG37 636 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 ARHGAP27Q6ZUM4 889 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 ANKRD31Q8N7Z5 1873 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 MAPK8IP3Q9UPT6 1336 aa9.5□□□□□ -0.89
TRAV38-1-201ENST00000390464 DPEP1P16444 411 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 FKBP8Q14318 412 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 DALRD3Q5D0E6 543 aaKnown RBP9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 ZBTB1Q9Y2K1 713 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 NUP98P52948 1817 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 ADCY9O60503 1353 aa9.49□□□□□ -0.89
TRAV38-1-201ENST00000390464 ZNF496Q96IT1 587 aaPredicted RBP9.48□□□□□ -0.89
TRAV38-1-201ENST00000390464 CARMIL3Q8ND23 1372 aa9.48□□□□□ -0.89
TRAV38-1-201ENST00000390464 COL11A2P13942 1736 aaPredicted RBP9.48□□□□□ -0.89
TRAV38-1-201ENST00000390464 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 CEMIPQ8WUJ3 1361 aa9.47□□□□□ -0.89
TRAV38-1-201ENST00000390464 H0YIN7 160 aa9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 HTATSF1O43719 755 aaKnown RBP9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 ST5P78524 1137 aa9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 DDR1Q08345 913 aa9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 NFIXQ14938 502 aa9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 PHACTR3Q96KR7 559 aa9.46□□□□□ -0.9
TRAV38-1-201ENST00000390464 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 SERPINB2P05120 415 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 MCM10Q7L590 875 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 CNBD1Q8NA66 436 aa9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
TRAV38-1-201ENST00000390464 SETDB2Q96T68 719 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms