RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 POLA1P09884 1462 aaPredicted RBP13.82□□□□□ -0.2
SEMA6D-206ENST00000389428 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
SEMA6D-206ENST00000389428 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-206ENST00000389428 TDRD12Q587J7 1177 aaKnown RBP13.82□□□□□ -0.2
SEMA6D-206ENST00000389428 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 NEMFO60524 1076 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 LMAN1P49257 510 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 CAMK4Q16566 473 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 KIF18AQ8NI77 898 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 KIF1BPQ96EK5 621 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 ABCF2Q9UG63 623 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 PRDM11Q9NQV5 511 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 MRPS9P82933 396 aaKnown RBP13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 SCAND2PQ9GZW5 306 aaPredicted RBP13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 NCOA2Q15596 1464 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
SEMA6D-206ENST00000389428 MINDY4BA8MYZ0 360 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 NLRP5P59047 1200 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 C8orf76Q96K31 380 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 DAPK1P53355 1430 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 GLRX3O76003 335 aaKnown RBP13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 CCDC172P0C7W6 258 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 CFAP70Q5T0N1 1121 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 RPGRIP1LQ68CZ1 1315 aa13.8□□□□□ -0.2
SEMA6D-206ENST00000389428 GOLGA6L9A6NEM1 432 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 CCDC40Q4G0X9 1142 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 LRRC9Q6ZRR7 1453 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 LIG1P18858 919 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 GSDMDP57764 484 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
SEMA6D-206ENST00000389428 MX1P20591 662 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 CNNM3Q8NE01 707 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 EHBP1L1Q8N3D4 1523 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 URI1O94763 535 aaPredicted RBP13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 CEP112Q8N8E3 955 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 ACTN2P35609 894 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 PPP1R14CQ8TAE6 165 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 PKNOX2Q96KN3 472 aa13.78□□□□□ -0.2
SEMA6D-206ENST00000389428 FCHSD2O94868 740 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 KIF5BP33176 963 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 CTR9Q6PD62 1173 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 SYCE3A1L190 88 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 TMCO5BA8MYB1 307 aa13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 RRP9O43818 475 aaKnown RBP13.77□□□□□ -0.2
SEMA6D-206ENST00000389428 ZNF213O14771 459 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 PRC1O43663 620 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 TTF1Q15361 905 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 KANK3Q6NY19 840 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 MPNDQ8N594 471 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 SYCP3Q8IZU3 236 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 TBC1D5Q92609 795 aa13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
SEMA6D-206ENST00000389428 GOLIM4O00461 696 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 STX1AQ16623 288 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 MYD88Q99836 296 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 TNNT1P13805 278 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 MAATS1Q7Z4T9 603 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 HLTFQ14527 1009 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 CALCOCO1Q9P1Z2 691 aa13.76□□□□□ -0.21
SEMA6D-206ENST00000389428 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms