RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
SEC13-203ENST00000383801 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
SEC13-203ENST00000383801 PDIA6Q15084 440 aa16.91■□□□□ 0.3
SEC13-203ENST00000383801 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
SEC13-203ENST00000383801 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
SEC13-203ENST00000383801 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
SEC13-203ENST00000383801 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
SEC13-203ENST00000383801 UBR2Q8IWV8 1755 aa16.9■□□□□ 0.3
SEC13-203ENST00000383801 LINS1Q8NG48 757 aa16.89■□□□□ 0.29
SEC13-203ENST00000383801 TEX13AQ9BXU3 409 aaPredicted RBP16.89■□□□□ 0.29
SEC13-203ENST00000383801 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
SEC13-203ENST00000383801 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
SEC13-203ENST00000383801 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
SEC13-203ENST00000383801 ADCY9O60503 1353 aa16.89■□□□□ 0.29
SEC13-203ENST00000383801 LRP6O75581 1613 aa16.89■□□□□ 0.29
SEC13-203ENST00000383801 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
SEC13-203ENST00000383801 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
SEC13-203ENST00000383801 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
SEC13-203ENST00000383801 C5P01031 1676 aa16.87■□□□□ 0.29
SEC13-203ENST00000383801 UTYO14607 1347 aa16.87■□□□□ 0.29
SEC13-203ENST00000383801 EXOC5O00471 708 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 DDX54Q8TDD1 881 aaKnown RBP16.86■□□□□ 0.29
SEC13-203ENST00000383801 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 RAB11FIP3O75154 756 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 MTX1Q13505 466 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
SEC13-203ENST00000383801 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
SEC13-203ENST00000383801 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
SEC13-203ENST00000383801 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
SEC13-203ENST00000383801 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 PRAMEF22A3QJZ6 481 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 POLA2Q14181 598 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 METTL22Q9BUU2 404 aaPredicted RBP16.84■□□□□ 0.29
SEC13-203ENST00000383801 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
SEC13-203ENST00000383801 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
SEC13-203ENST00000383801 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.29
SEC13-203ENST00000383801 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
SEC13-203ENST00000383801 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
SEC13-203ENST00000383801 GLI3P10071 1580 aa16.83■□□□□ 0.28
SEC13-203ENST00000383801 NRAPQ86VF7 1730 aa16.83■□□□□ 0.28
SEC13-203ENST00000383801 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
SEC13-203ENST00000383801 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
SEC13-203ENST00000383801 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
SEC13-203ENST00000383801 PLEKHM2Q8IWE5 1019 aa16.82■□□□□ 0.28
SEC13-203ENST00000383801 SLIT2O94813 1529 aa16.82■□□□□ 0.28
SEC13-203ENST00000383801 COL15A1P39059 1388 aa16.82■□□□□ 0.28
SEC13-203ENST00000383801 ANXA1P04083 346 aa16.81■□□□□ 0.28
SEC13-203ENST00000383801 PLBD2Q8NHP8 589 aa16.81■□□□□ 0.28
SEC13-203ENST00000383801 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
SEC13-203ENST00000383801 UBAP1LF5GYI3 381 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 GRM8O00222 908 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 XAGE3Q8WTP9 111 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 JCADQ9P266 1359 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
SEC13-203ENST00000383801 NBPF7P0C2Y1 421 aaPredicted RBP16.8■□□□□ 0.28
SEC13-203ENST00000383801 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
SEC13-203ENST00000383801 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
SEC13-203ENST00000383801 MYL6BP14649 208 aa16.79■□□□□ 0.28
SEC13-203ENST00000383801 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
SEC13-203ENST00000383801 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
SEC13-203ENST00000383801 SPATA31A5Q5VU36 1347 aa16.79■□□□□ 0.28
SEC13-203ENST00000383801 SPATA31A7Q8IWB4 1347 aa16.79■□□□□ 0.28
SEC13-203ENST00000383801 BCL9O00512 1426 aa16.78■□□□□ 0.28
SEC13-203ENST00000383801 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
SEC13-203ENST00000383801 AIMP1Q12904 312 aaKnown RBP16.78■□□□□ 0.28
SEC13-203ENST00000383801 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
SEC13-203ENST00000383801 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
SEC13-203ENST00000383801 ITGB4P16144 1822 aa16.78■□□□□ 0.28
SEC13-203ENST00000383801 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 ADAMTS2O95450 1211 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 STARD3NLO95772 234 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 DDB1Q16531 1140 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 PIGBQ92521 554 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.28
SEC13-203ENST00000383801 AOX1Q06278 1338 aa16.77■□□□□ 0.27
SEC13-203ENST00000383801 MSH5O43196 834 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 SRGAP3O43295 1099 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 IGKV5-2P06315 115 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 GCKRQ14397 625 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 STAP2Q9UGK3 403 aa16.76■□□□□ 0.27
SEC13-203ENST00000383801 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
SEC13-203ENST00000383801 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
SEC13-203ENST00000383801 CDC45O75419 566 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 SEC24BO95487 1268 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
SEC13-203ENST00000383801 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 SALL3Q9BXA9 1300 aa16.74■□□□□ 0.27
SEC13-203ENST00000383801 NBPF26B4DH59 902 aa16.73■□□□□ 0.27
SEC13-203ENST00000383801 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
SEC13-203ENST00000383801 PDE1AP54750 535 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms