RNA–Protein interactions for RNA: ENST00000382447.8

CBWD1-207, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-207ENST00000382447 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
CBWD1-207ENST00000382447 LTBP1Q14766 1721 aa11.71□□□□□ -0.54
CBWD1-207ENST00000382447 AOC2O75106 756 aa11.7□□□□□ -0.54
CBWD1-207ENST00000382447 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
CBWD1-207ENST00000382447 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.54
CBWD1-207ENST00000382447 MAP2P11137 1827 aaKnown RBP11.7□□□□□ -0.54
CBWD1-207ENST00000382447 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
CBWD1-207ENST00000382447 CYP27B1O15528 508 aa11.69□□□□□ -0.54
CBWD1-207ENST00000382447 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
CBWD1-207ENST00000382447 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
CBWD1-207ENST00000382447 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
CBWD1-207ENST00000382447 CCDC88AQ3V6T2 1871 aa11.68□□□□□ -0.54
CBWD1-207ENST00000382447 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-207ENST00000382447 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
CBWD1-207ENST00000382447 POTEHQ6S545 545 aa11.68□□□□□ -0.54
CBWD1-207ENST00000382447 PNMA8AQ86V59 439 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-207ENST00000382447 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
CBWD1-207ENST00000382447 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
CBWD1-207ENST00000382447 HOXC9P31274 260 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 EPHX2P34913 555 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
CBWD1-207ENST00000382447 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
CBWD1-207ENST00000382447 AMPHP49418 695 aa11.66□□□□□ -0.54
CBWD1-207ENST00000382447 SRP68Q9UHB9 627 aaKnown RBP11.66□□□□□ -0.54
CBWD1-207ENST00000382447 SMG6Q86US8 1419 aaKnown RBP11.66□□□□□ -0.54
CBWD1-207ENST00000382447 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 CNTNAP4Q9C0A0 1308 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 C2CD5Q86YS7 1000 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 TAOK3Q9H2K8 898 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
CBWD1-207ENST00000382447 ITGB4P16144 1822 aa11.65□□□□□ -0.55
CBWD1-207ENST00000382447 SCN4AP35499 1836 aa11.65□□□□□ -0.55
CBWD1-207ENST00000382447 USP42Q9H9J4 1324 aaKnown RBP11.64□□□□□ -0.55
CBWD1-207ENST00000382447 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
CBWD1-207ENST00000382447 H0YIN7 160 aa11.64□□□□□ -0.55
CBWD1-207ENST00000382447 C21orf2O43822 256 aa11.64□□□□□ -0.55
CBWD1-207ENST00000382447 TM4SF1P30408 202 aa11.64□□□□□ -0.55
CBWD1-207ENST00000382447 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
CBWD1-207ENST00000382447 CIAPIN1Q6FI81 312 aa11.63□□□□□ -0.55
CBWD1-207ENST00000382447 RGPD2P0DJD1 1756 aa11.63□□□□□ -0.55
CBWD1-207ENST00000382447 PITPNM2Q9BZ72 1349 aa11.62□□□□□ -0.55
CBWD1-207ENST00000382447 NCAPD2Q15021 1401 aa11.62□□□□□ -0.55
CBWD1-207ENST00000382447 FMR1Q06787 632 aaKnown RBP eCLIP11.62□□□□□ -0.55
CBWD1-207ENST00000382447 CST9Q5W186 159 aa11.62□□□□□ -0.55
CBWD1-207ENST00000382447 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
CBWD1-207ENST00000382447 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
CBWD1-207ENST00000382447 DICER1Q9UPY3 1922 aaKnown RBP11.62□□□□□ -0.55
CBWD1-207ENST00000382447 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
CBWD1-207ENST00000382447 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
CBWD1-207ENST00000382447 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
CBWD1-207ENST00000382447 KDRP35968 1356 aa11.61□□□□□ -0.55
CBWD1-207ENST00000382447 ADAMTSL1Q8N6G6 1762 aa11.61□□□□□ -0.55
CBWD1-207ENST00000382447 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
CBWD1-207ENST00000382447 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
CBWD1-207ENST00000382447 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
CBWD1-207ENST00000382447 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
CBWD1-207ENST00000382447 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
CBWD1-207ENST00000382447 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
CBWD1-207ENST00000382447 SAPCD2Q86UD0 394 aa11.59□□□□□ -0.55
CBWD1-207ENST00000382447 HHIPL1Q96JK4 782 aa11.59□□□□□ -0.55
CBWD1-207ENST00000382447 TESK2Q96S53 571 aa11.59□□□□□ -0.55
CBWD1-207ENST00000382447 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
CBWD1-207ENST00000382447 ZPR1O75312 459 aa11.58□□□□□ -0.56
CBWD1-207ENST00000382447 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
CBWD1-207ENST00000382447 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
CBWD1-207ENST00000382447 TRAF5O00463 557 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 SERPINB2P05120 415 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 FBLN1P23142 703 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 NOGQ13253 232 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 NFIXQ14938 502 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 USPL1Q5W0Q7 1092 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 CARD11Q9BXL7 1154 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 SPG7Q9UQ90 795 aa11.57□□□□□ -0.56
CBWD1-207ENST00000382447 DLEC1Q9Y238 1755 aa11.56□□□□□ -0.56
CBWD1-207ENST00000382447 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
CBWD1-207ENST00000382447 BICDL1Q6ZP65 573 aa11.56□□□□□ -0.56
CBWD1-207ENST00000382447 SAGE1Q9NXZ1 904 aa11.56□□□□□ -0.56
CBWD1-207ENST00000382447 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
CBWD1-207ENST00000382447 INSRP06213 1382 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 A0A0C4DFX4 3053 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
CBWD1-207ENST00000382447 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 COG3Q96JB2 828 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
CBWD1-207ENST00000382447 CUL9Q8IWT3 2517 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
CBWD1-207ENST00000382447 CELF2O95319 508 aaKnown RBP11.54□□□□□ -0.56
CBWD1-207ENST00000382447 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
CBWD1-207ENST00000382447 ZIC5Q96T25 663 aa11.54□□□□□ -0.56
CBWD1-207ENST00000382447 PDE6BP35913 854 aa11.53□□□□□ -0.56
CBWD1-207ENST00000382447 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms