RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 MSANTD4Q8NCY6 345 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 GAS2L2Q8NHY3 880 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 LACTBP83111 547 aaPredicted RBP11.4□□□□□ -0.58
VLDLR-203ENST00000382100 PDE6BP35913 854 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 GABPB1Q06547 395 aaPredicted RBP11.4□□□□□ -0.58
VLDLR-203ENST00000382100 SPECC1Q5M775 1068 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
VLDLR-203ENST00000382100 CCDC114Q96M63 670 aa11.4□□□□□ -0.59
VLDLR-203ENST00000382100 EIF2AQ9BY44 585 aaKnown RBP11.4□□□□□ -0.59
VLDLR-203ENST00000382100 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.59
VLDLR-203ENST00000382100 MYO9BQ13459 2157 aa11.4□□□□□ -0.59
VLDLR-203ENST00000382100 GBP1P32455 592 aa11.4□□□□□ -0.59
VLDLR-203ENST00000382100 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 SETDB1Q15047 1291 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA8QA0A0J9YX86 632 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA8OA6NCC3 632 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA8NF8WBI6 632 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 K7ELQ4 463 aaPredicted RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 NEBLO76041 1014 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 ME1P48163 572 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 CCDC178Q5BJE1 867 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 UBTFL1P0CB47 393 aaPredicted RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 KIF5AQ12840 1032 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 HAUS8Q9BT25 410 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 CCDC82Q8N4S0 544 aa11.39□□□□□ -0.59
VLDLR-203ENST00000382100 ZMAT2Q96NC0 199 aaKnown RBP11.39□□□□□ -0.59
VLDLR-203ENST00000382100 CCDC40Q4G0X9 1142 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 EIF5P55010 431 aaKnown RBP11.38□□□□□ -0.59
VLDLR-203ENST00000382100 CSRNP2Q9H175 543 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 MPHOSPH6Q99547 160 aaKnown RBP11.38□□□□□ -0.59
VLDLR-203ENST00000382100 EIF4G1Q04637 1599 aaKnown RBP11.38□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA6CA6NDK9 693 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA6BA6NDN3 693 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA6DP0CG33 693 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 GOLGA6AQ9NYA3 693 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 MGEA5O60502 916 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 DEUP1Q05D60 604 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 FERMT2Q96AC1 680 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 SELENOOQ9BVL4 669 aa11.38□□□□□ -0.59
VLDLR-203ENST00000382100 CASQ2O14958 399 aaPredicted RBP11.37□□□□□ -0.59
VLDLR-203ENST00000382100 TDO2P48775 406 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 NLRP5P59047 1200 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 USP5P45974 858 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 EVI5O60447 810 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 CFAP58Q5T655 872 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 GTF2A1P52655 376 aaPredicted RBP11.37□□□□□ -0.59
VLDLR-203ENST00000382100 STX1AQ16623 288 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 TMEM266Q2M3C6 531 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 ZNF365Q70YC5 407 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 WHAMMP3Q1A5X7 153 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 BICDL1Q6ZP65 573 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 SPATA32Q96LK8 384 aa11.37□□□□□ -0.59
VLDLR-203ENST00000382100 DHX57Q6P158 1386 aaKnown RBP11.37□□□□□ -0.59
VLDLR-203ENST00000382100 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 FEZ2Q9UHY8 353 aaPredicted RBP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 PDE4CQ08493 712 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 Q9H521 79 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
VLDLR-203ENST00000382100 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
VLDLR-203ENST00000382100 SOGA3Q5TF21 947 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 APBB1IPQ7Z5R6 666 aaPredicted RBP11.35□□□□□ -0.59
VLDLR-203ENST00000382100 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 CCDC121Q6ZUS5 278 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 ZSCAN16Q9H4T2 348 aaPredicted RBP11.35□□□□□ -0.59
VLDLR-203ENST00000382100 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
VLDLR-203ENST00000382100 APBB1O00213 710 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 DIAPH1O60610 1272 aaKnown RBP11.35□□□□□ -0.59
VLDLR-203ENST00000382100 HSF2BPO75031 334 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 CACNA2D4Q7Z3S7 1137 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 TRIM7Q9C029 511 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 RASSF4Q9H2L5 321 aa11.35□□□□□ -0.59
VLDLR-203ENST00000382100 RAB11FIP3O75154 756 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 HSPA8P11142 646 aaKnown RBP11.34□□□□□ -0.59
VLDLR-203ENST00000382100 CASQ1P31415 396 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 NGDNQ8NEJ9 315 aaKnown RBP11.34□□□□□ -0.59
VLDLR-203ENST00000382100 SAMD15Q9P1V8 674 aa11.34□□□□□ -0.59
VLDLR-203ENST00000382100 RBBP5Q15291 538 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms