RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
PDGFB-202ENST00000381551 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.79
PDGFB-202ENST00000381551 CRKLP46109 303 aaKnown RBP20.01■□□□□ 0.79
PDGFB-202ENST00000381551 SLC15A2Q16348 729 aa20.01■□□□□ 0.79
PDGFB-202ENST00000381551 NBPF14Q5TI25 921 aa20.01■□□□□ 0.79
PDGFB-202ENST00000381551 NUP188Q5SRE5 1749 aa20■□□□□ 0.79
PDGFB-202ENST00000381551 A1BGP04217 495 aa20■□□□□ 0.79
PDGFB-202ENST00000381551 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
PDGFB-202ENST00000381551 ZNF827Q17R98 1081 aa20■□□□□ 0.79
PDGFB-202ENST00000381551 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
PDGFB-202ENST00000381551 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
PDGFB-202ENST00000381551 CCDC87Q9NVE4 849 aa20■□□□□ 0.79
PDGFB-202ENST00000381551 C5P01031 1676 aa20■□□□□ 0.79
PDGFB-202ENST00000381551 SOS1Q07889 1333 aaPredicted RBP20■□□□□ 0.79
PDGFB-202ENST00000381551 VAMP4O75379 141 aa19.99■□□□□ 0.79
PDGFB-202ENST00000381551 STK32BQ9NY57 414 aa19.99■□□□□ 0.79
PDGFB-202ENST00000381551 COL5A3P25940 1745 aaPredicted RBP19.99■□□□□ 0.79
PDGFB-202ENST00000381551 RPS6KA4O75676 772 aa19.98■□□□□ 0.79
PDGFB-202ENST00000381551 AK7Q96M32 723 aa19.98■□□□□ 0.79
PDGFB-202ENST00000381551 C4BP0C0L5 1744 aa19.98■□□□□ 0.79
PDGFB-202ENST00000381551 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
PDGFB-202ENST00000381551 NBPF26B4DH59 902 aa19.97■□□□□ 0.79
PDGFB-202ENST00000381551 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
PDGFB-202ENST00000381551 NBPF10Q6P3W6 841 aaKnown RBP19.97■□□□□ 0.79
PDGFB-202ENST00000381551 NBPF15Q8N660 670 aa19.97■□□□□ 0.79
PDGFB-202ENST00000381551 TFCP2L1Q9NZI6 479 aa19.97■□□□□ 0.79
PDGFB-202ENST00000381551 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
PDGFB-202ENST00000381551 GNPATO15228 680 aa19.96■□□□□ 0.79
PDGFB-202ENST00000381551 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
PDGFB-202ENST00000381551 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
PDGFB-202ENST00000381551 NECTIN2Q92692 538 aa19.96■□□□□ 0.79
PDGFB-202ENST00000381551 IL6STP40189 918 aaPredicted RBP19.95■□□□□ 0.78
PDGFB-202ENST00000381551 EIF5P55010 431 aaKnown RBP19.95■□□□□ 0.78
PDGFB-202ENST00000381551 PDIA6Q15084 440 aa19.95■□□□□ 0.78
PDGFB-202ENST00000381551 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
PDGFB-202ENST00000381551 CHMP4AQ9BY43 222 aa19.95■□□□□ 0.78
PDGFB-202ENST00000381551 RTCBQ9Y3I0 505 aaKnown RBP19.95■□□□□ 0.78
PDGFB-202ENST00000381551 ERBB4Q15303 1308 aa19.95■□□□□ 0.78
PDGFB-202ENST00000381551 PIP4K2AP48426 406 aaPredicted RBP19.94■□□□□ 0.78
PDGFB-202ENST00000381551 SSFA2P28290 1259 aa19.93■□□□□ 0.78
PDGFB-202ENST00000381551 TRAPPC3LQ5T215 181 aa19.93■□□□□ 0.78
PDGFB-202ENST00000381551 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
PDGFB-202ENST00000381551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.92■□□□□ 0.78
PDGFB-202ENST00000381551 PROSER3Q2NL68 480 aa19.92■□□□□ 0.78
PDGFB-202ENST00000381551 FLAD1Q8NFF5 587 aa19.92■□□□□ 0.78
PDGFB-202ENST00000381551 ARHGEF1Q92888 912 aaKnown RBP19.92■□□□□ 0.78
PDGFB-202ENST00000381551 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
PDGFB-202ENST00000381551 CHPF2Q9P2E5 772 aa19.92■□□□□ 0.78
PDGFB-202ENST00000381551 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
PDGFB-202ENST00000381551 PNPLA7Q6ZV29 1317 aa19.92■□□□□ 0.78
PDGFB-202ENST00000381551 LAMB4A4D0S4 1761 aa19.92■□□□□ 0.78
PDGFB-202ENST00000381551 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
PDGFB-202ENST00000381551 MYL6BP14649 208 aa19.91■□□□□ 0.78
PDGFB-202ENST00000381551 ADRA2BP18089 450 aa19.91■□□□□ 0.78
PDGFB-202ENST00000381551 R3HDM1Q15032 1099 aaKnown RBP19.91■□□□□ 0.78
PDGFB-202ENST00000381551 LRP10Q7Z4F1 713 aa19.91■□□□□ 0.78
PDGFB-202ENST00000381551 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
PDGFB-202ENST00000381551 TCERG1O14776 1098 aaKnown RBP19.9■□□□□ 0.78
PDGFB-202ENST00000381551 PHF14O94880 888 aa19.9■□□□□ 0.78
PDGFB-202ENST00000381551 ANXA1P04083 346 aa19.9■□□□□ 0.78
PDGFB-202ENST00000381551 ZNF428Q96B54 188 aa19.9■□□□□ 0.78
PDGFB-202ENST00000381551 UBR3Q6ZT12 1888 aa19.9■□□□□ 0.78
PDGFB-202ENST00000381551 A0A087WZG4 1122 aa19.88■□□□□ 0.77
PDGFB-202ENST00000381551 PSDA5PKW4 1024 aaPredicted RBP19.88■□□□□ 0.77
PDGFB-202ENST00000381551 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
PDGFB-202ENST00000381551 STK31Q9BXU1 1019 aa19.88■□□□□ 0.77
PDGFB-202ENST00000381551 PDGFDQ9GZP0 370 aaPredicted RBP19.88■□□□□ 0.77
PDGFB-202ENST00000381551 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
PDGFB-202ENST00000381551 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
PDGFB-202ENST00000381551 RFC4P35249 363 aa19.87■□□□□ 0.77
PDGFB-202ENST00000381551 NPM2Q86SE8 214 aaKnown RBP19.87■□□□□ 0.77
PDGFB-202ENST00000381551 COL15A1P39059 1388 aa19.86■□□□□ 0.77
PDGFB-202ENST00000381551 COPS6Q7L5N1 327 aa19.86■□□□□ 0.77
PDGFB-202ENST00000381551 NARFQ9UHQ1 456 aa19.86■□□□□ 0.77
PDGFB-202ENST00000381551 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
PDGFB-202ENST00000381551 MSH5O43196 834 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 SSH1Q8WYL5 1049 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 ARXQ96QS3 562 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 PHAXQ9H814 394 aaKnown RBP19.85■□□□□ 0.77
PDGFB-202ENST00000381551 TUBGCP6Q96RT7 1819 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 QSER1Q2KHR3 1735 aa19.85■□□□□ 0.77
PDGFB-202ENST00000381551 DZIP3Q86Y13 1208 aaKnown RBP19.84■□□□□ 0.77
PDGFB-202ENST00000381551 XAGE3Q8WTP9 111 aa19.84■□□□□ 0.77
PDGFB-202ENST00000381551 ZPR1O75312 459 aa19.83■□□□□ 0.77
PDGFB-202ENST00000381551 RARSP54136 660 aaKnown RBP19.83■□□□□ 0.77
PDGFB-202ENST00000381551 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.77
PDGFB-202ENST00000381551 G2E3Q7L622 706 aa19.83■□□□□ 0.77
PDGFB-202ENST00000381551 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.77
PDGFB-202ENST00000381551 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
PDGFB-202ENST00000381551 SRP68Q9UHB9 627 aaKnown RBP19.83■□□□□ 0.77
PDGFB-202ENST00000381551 USP42Q9H9J4 1324 aaKnown RBP19.82■□□□□ 0.76
PDGFB-202ENST00000381551 USPL1Q5W0Q7 1092 aa19.82■□□□□ 0.76
PDGFB-202ENST00000381551 ERVV-1B6SEH8 477 aa19.81■□□□□ 0.76
PDGFB-202ENST00000381551 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
PDGFB-202ENST00000381551 BCL2L12Q9HB09 334 aa19.81■□□□□ 0.76
PDGFB-202ENST00000381551 GYS1P13807 737 aa19.8■□□□□ 0.76
PDGFB-202ENST00000381551 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
PDGFB-202ENST00000381551 ANKRD13DQ6ZTN6 518 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms