RNA–Protein interactions for RNA: ENST00000381448.8

SMG1P4-202, Transcript of SMG1 pseudogene 4, humanhuman

TSL 5

Gene SMG1P4, Length 868 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-202ENST00000381448 ZNF496Q96IT1 587 aaPredicted RBP12.05□□□□□ -0.48
SMG1P4-202ENST00000381448 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
SMG1P4-202ENST00000381448 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
SMG1P4-202ENST00000381448 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
SMG1P4-202ENST00000381448 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
SMG1P4-202ENST00000381448 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
SMG1P4-202ENST00000381448 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
SMG1P4-202ENST00000381448 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
SMG1P4-202ENST00000381448 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
SMG1P4-202ENST00000381448 SOS1Q07889 1333 aaPredicted RBP12.03□□□□□ -0.48
SMG1P4-202ENST00000381448 CICQ96RK0 1608 aaPredicted RBP12.03□□□□□ -0.48
SMG1P4-202ENST00000381448 COL15A1P39059 1388 aa12.03□□□□□ -0.48
SMG1P4-202ENST00000381448 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.48
SMG1P4-202ENST00000381448 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
SMG1P4-202ENST00000381448 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 RIPK4P57078 832 aa12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 PRKRIP1Q9H875 184 aaPredicted RBP12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 ZBTB1Q9Y2K1 713 aa12.02□□□□□ -0.49
SMG1P4-202ENST00000381448 NPHP1O15259 732 aa12.01□□□□□ -0.49
SMG1P4-202ENST00000381448 FKBP8Q14318 412 aa12.01□□□□□ -0.49
SMG1P4-202ENST00000381448 SRP68Q9UHB9 627 aaKnown RBP12.01□□□□□ -0.49
SMG1P4-202ENST00000381448 UTRNP46939 3433 aa12.01□□□□□ -0.49
SMG1P4-202ENST00000381448 TJP1Q07157 1748 aa12□□□□□ -0.49
SMG1P4-202ENST00000381448 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
SMG1P4-202ENST00000381448 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
SMG1P4-202ENST00000381448 RUNDC1Q96C34 613 aa12□□□□□ -0.49
SMG1P4-202ENST00000381448 BABAM1Q9NWV8 329 aa12□□□□□ -0.49
SMG1P4-202ENST00000381448 ZNF652Q9Y2D9 606 aa12□□□□□ -0.49
SMG1P4-202ENST00000381448 TM4SF1P30408 202 aa11.99□□□□□ -0.49
SMG1P4-202ENST00000381448 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
SMG1P4-202ENST00000381448 UBR2Q8IWV8 1755 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 ANP32CO43423 234 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 KCNQ3O43525 872 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 A1BGP04217 495 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 TSPYL4Q9UJ04 414 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 PDZRN3Q9UPQ7 1066 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 MYH14Q7Z406 1995 aaKnown RBP11.98□□□□□ -0.49
SMG1P4-202ENST00000381448 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 POLRMTO00411 1230 aaKnown RBP11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 CLEC4GQ6UXB4 293 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
SMG1P4-202ENST00000381448 SERPINB2P05120 415 aa11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 NFIXQ14938 502 aa11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 C4AP0C0L4 1744 aa11.96□□□□□ -0.49
SMG1P4-202ENST00000381448 RGL2O15211 777 aa11.95□□□□□ -0.5
SMG1P4-202ENST00000381448 PDE6BP35913 854 aa11.95□□□□□ -0.5
SMG1P4-202ENST00000381448 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
SMG1P4-202ENST00000381448 ST5P78524 1137 aa11.95□□□□□ -0.5
SMG1P4-202ENST00000381448 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
SMG1P4-202ENST00000381448 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 H0YIN7 160 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 GIGYF1O75420 1035 aaPredicted RBP11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 DPEP1P16444 411 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 DDR1Q08345 913 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 KIF6Q6ZMV9 814 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 WWC3Q9ULE0 1092 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 CHD4Q14839 1912 aa11.94□□□□□ -0.5
SMG1P4-202ENST00000381448 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
SMG1P4-202ENST00000381448 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
SMG1P4-202ENST00000381448 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
SMG1P4-202ENST00000381448 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 PRAMEF22A3QJZ6 481 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
SMG1P4-202ENST00000381448 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 NYXQ9GZU5 481 aa11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
SMG1P4-202ENST00000381448 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
SMG1P4-202ENST00000381448 MYL6BP14649 208 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms