RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 KIF6Q6ZMV9 814 aa15.08■□□□□ 0
CDX2-201ENST00000381020 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
CDX2-201ENST00000381020 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
CDX2-201ENST00000381020 FAM184AQ8NB25 1140 aa15.08■□□□□ 0
CDX2-201ENST00000381020 TNPO1Q92973 898 aaKnown RBP15.08■□□□□ 0
CDX2-201ENST00000381020 TMOD3Q9NYL9 352 aa15.08■□□□□ 0
CDX2-201ENST00000381020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.07■□□□□ 0
CDX2-201ENST00000381020 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
CDX2-201ENST00000381020 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
CDX2-201ENST00000381020 DIP2BQ9P265 1576 aa15.07■□□□□ 0
CDX2-201ENST00000381020 CPSF1Q10570 1443 aaKnown RBP15.07■□□□□ 0
CDX2-201ENST00000381020 H3BQV1 296 aa15.07■□□□□ 0
CDX2-201ENST00000381020 IFFO2Q5TF58 517 aa15.07■□□□□ 0
CDX2-201ENST00000381020 FKBP4Q02790 459 aaKnown RBP eCLIP15.07■□□□□ 0
CDX2-201ENST00000381020 STK3Q13188 491 aa15.07■□□□□ 0
CDX2-201ENST00000381020 GRM8O00222 908 aa15.07■□□□□ 0
CDX2-201ENST00000381020 GNL2Q13823 731 aaKnown RBP15.07■□□□□ 0
CDX2-201ENST00000381020 ZCRB1Q8TBF4 217 aaKnown RBP15.07■□□□□ 0
CDX2-201ENST00000381020 KIAA0232Q92628 1395 aa15.06■□□□□ 0
CDX2-201ENST00000381020 PRPF40BQ6NWY9 871 aaKnown RBP15.06■□□□□ 0
CDX2-201ENST00000381020 GPTP24298 496 aa15.06■□□□□ 0
CDX2-201ENST00000381020 CCDC57Q2TAC2 916 aa15.06■□□□□ 0
CDX2-201ENST00000381020 USP44Q9H0E7 712 aa15.06■□□□□ 0
CDX2-201ENST00000381020 ECHDC1Q9NTX5 307 aa15.06■□□□□ 0
CDX2-201ENST00000381020 ZNF790Q6PG37 636 aa15.06■□□□□ 0
CDX2-201ENST00000381020 RNF214Q8ND24 703 aa15.05■□□□□ 0
CDX2-201ENST00000381020 KLHDC4Q8TBB5 520 aa15.05■□□□□ 0
CDX2-201ENST00000381020 PREX1Q8TCU6 1659 aa15.05■□□□□ 0
CDX2-201ENST00000381020 CPS1P31327 1500 aa15.05■□□□□ 0
CDX2-201ENST00000381020 RTL1A6NKG5 1358 aa15.05■□□□□ 0
CDX2-201ENST00000381020 GSPT1P15170 499 aaKnown RBP15.05■□□□□ -0
CDX2-201ENST00000381020 CASTP20810 708 aaKnown RBP15.05■□□□□ -0
CDX2-201ENST00000381020 MSNP26038 577 aaKnown RBP15.05■□□□□ -0
CDX2-201ENST00000381020 ADAMTS13Q76LX8 1427 aa15.05■□□□□ -0
CDX2-201ENST00000381020 PRAMEF22A3QJZ6 481 aa15.05■□□□□ -0
CDX2-201ENST00000381020 MCM2P49736 904 aa15.05■□□□□ -0
CDX2-201ENST00000381020 PPLO60437 1756 aa15.04■□□□□ -0
CDX2-201ENST00000381020 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
CDX2-201ENST00000381020 ARHGEF25Q86VW2 580 aa15.04■□□□□ -0
CDX2-201ENST00000381020 LINS1Q8NG48 757 aa15.04■□□□□ -0
CDX2-201ENST00000381020 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
CDX2-201ENST00000381020 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
CDX2-201ENST00000381020 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
CDX2-201ENST00000381020 CEP126Q9P2H0 1117 aa15.04■□□□□ -0
CDX2-201ENST00000381020 CIZ1Q9ULV3 898 aaPredicted RBP15.04■□□□□ -0
CDX2-201ENST00000381020 FIBPO43427 364 aa15.03■□□□□ -0
CDX2-201ENST00000381020 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
CDX2-201ENST00000381020 AGLP35573 1532 aa15.03■□□□□ -0
CDX2-201ENST00000381020 ESYT1Q9BSJ8 1104 aa15.03■□□□□ -0
CDX2-201ENST00000381020 SOS1Q07889 1333 aaPredicted RBP15.03■□□□□ -0
CDX2-201ENST00000381020 BRPF1P55201 1214 aaPredicted RBP15.02■□□□□ -0
CDX2-201ENST00000381020 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
CDX2-201ENST00000381020 TMEM131LA2VDJ0 1609 aa15.02■□□□□ -0
CDX2-201ENST00000381020 TMEM94Q12767 1356 aa15.02■□□□□ -0
CDX2-201ENST00000381020 KDM4AO75164 1064 aa15.02■□□□□ -0
CDX2-201ENST00000381020 PROSER3Q2NL68 480 aa15.02■□□□□ -0
CDX2-201ENST00000381020 CWC22Q9HCG8 908 aaKnown RBP15.02□□□□□ -0.01
CDX2-201ENST00000381020 ZC3H13Q5T200 1668 aaKnown RBP15.01□□□□□ -0.01
CDX2-201ENST00000381020 STARD3NLO95772 234 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 LMBR1LQ6UX01 489 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 USP26Q9BXU7 913 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 AXIN2Q9Y2T1 843 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
CDX2-201ENST00000381020 HIP1O00291 1037 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 GIGYF1O75420 1035 aaPredicted RBP15.01□□□□□ -0.01
CDX2-201ENST00000381020 ALDH1L1O75891 902 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 PSMA5P28066 241 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 DCAF5Q96JK2 942 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 TCEANC2Q96MN5 208 aa15.01□□□□□ -0.01
CDX2-201ENST00000381020 BICC1Q9H694 974 aaKnown RBP15.01□□□□□ -0.01
CDX2-201ENST00000381020 DTNBO60941 627 aa15□□□□□ -0.01
CDX2-201ENST00000381020 DRC7Q8IY82 874 aa15□□□□□ -0.01
CDX2-201ENST00000381020 SNRKQ9NRH2 765 aa15□□□□□ -0.01
CDX2-201ENST00000381020 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
CDX2-201ENST00000381020 USP16Q9Y5T5 823 aa15□□□□□ -0.01
CDX2-201ENST00000381020 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
CDX2-201ENST00000381020 MED14O60244 1454 aa15□□□□□ -0.01
CDX2-201ENST00000381020 BLOC1S2Q6QNY1 142 aa15□□□□□ -0.01
CDX2-201ENST00000381020 CD163L1Q9NR16 1453 aa15□□□□□ -0.01
CDX2-201ENST00000381020 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
CDX2-201ENST00000381020 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
CDX2-201ENST00000381020 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
CDX2-201ENST00000381020 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
CDX2-201ENST00000381020 CCDC158Q5M9N0 1113 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 CCDC83Q8IWF9 413 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 ZGPATQ8N5A5 531 aaKnown RBP14.99□□□□□ -0.01
CDX2-201ENST00000381020 GDPD2Q9HCC8 539 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 CHMLP26374 656 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
CDX2-201ENST00000381020 MRE11P49959 708 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 SF3A1Q15459 793 aaKnown RBP14.98□□□□□ -0.01
CDX2-201ENST00000381020 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 SLC52A2Q9HAB3 445 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 EXOC5O00471 708 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 CPLX1O14810 134 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 A1BGP04217 495 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
CDX2-201ENST00000381020 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms