RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.42
CLCN4-201ENST00000380829 CYP27B1O15528 508 aa17.64■□□□□ 0.41
CLCN4-201ENST00000380829 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
CLCN4-201ENST00000380829 SRCIN1Q9C0H9 1055 aa17.64■□□□□ 0.41
CLCN4-201ENST00000380829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLCN4-201ENST00000380829 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.41
CLCN4-201ENST00000380829 UBTFL1P0CB47 393 aaPredicted RBP17.63■□□□□ 0.41
CLCN4-201ENST00000380829 DNAAF4Q8WXU2 420 aa17.63■□□□□ 0.41
CLCN4-201ENST00000380829 N4BP2Q86UW6 1770 aaPredicted RBP17.63■□□□□ 0.41
CLCN4-201ENST00000380829 RRP9O43818 475 aaKnown RBP17.63■□□□□ 0.41
CLCN4-201ENST00000380829 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
CLCN4-201ENST00000380829 ADCY9O60503 1353 aa17.62■□□□□ 0.41
CLCN4-201ENST00000380829 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
CLCN4-201ENST00000380829 SCN11AQ9UI33 1791 aa17.62■□□□□ 0.41
CLCN4-201ENST00000380829 XRCC6P12956 609 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLCN4-201ENST00000380829 ATP8B2P98198 1209 aa17.62■□□□□ 0.41
CLCN4-201ENST00000380829 BEND3Q5T5X7 828 aa17.61■□□□□ 0.41
CLCN4-201ENST00000380829 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
CLCN4-201ENST00000380829 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
CLCN4-201ENST00000380829 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
CLCN4-201ENST00000380829 BECN1Q14457 450 aa17.6■□□□□ 0.41
CLCN4-201ENST00000380829 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
CLCN4-201ENST00000380829 WDR17Q8IZU2 1322 aa17.6■□□□□ 0.41
CLCN4-201ENST00000380829 CLCN1P35523 988 aa17.59■□□□□ 0.41
CLCN4-201ENST00000380829 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
CLCN4-201ENST00000380829 COL5A2P05997 1499 aaPredicted RBP17.58■□□□□ 0.41
CLCN4-201ENST00000380829 CDC45O75419 566 aa17.58■□□□□ 0.41
CLCN4-201ENST00000380829 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.41
CLCN4-201ENST00000380829 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.41
CLCN4-201ENST00000380829 STRN4Q9NRL3 753 aa17.58■□□□□ 0.41
CLCN4-201ENST00000380829 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.4
CLCN4-201ENST00000380829 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.4
CLCN4-201ENST00000380829 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
CLCN4-201ENST00000380829 PDIA6Q15084 440 aa17.57■□□□□ 0.4
CLCN4-201ENST00000380829 LRRCC1Q9C099 1032 aa17.57■□□□□ 0.4
CLCN4-201ENST00000380829 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
CLCN4-201ENST00000380829 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 C5P01031 1676 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLCN4-201ENST00000380829 MYL6BP14649 208 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 CABP4P57796 275 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 TSHZ3Q63HK5 1081 aa17.56■□□□□ 0.4
CLCN4-201ENST00000380829 IBTKQ9P2D0 1353 aaPredicted RBP17.55■□□□□ 0.4
CLCN4-201ENST00000380829 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
CLCN4-201ENST00000380829 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
CLCN4-201ENST00000380829 SDSP20132 328 aa17.55■□□□□ 0.4
CLCN4-201ENST00000380829 CWF19L2Q2TBE0 894 aaKnown RBP17.55■□□□□ 0.4
CLCN4-201ENST00000380829 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
CLCN4-201ENST00000380829 MRC1P22897 1456 aa17.55■□□□□ 0.4
CLCN4-201ENST00000380829 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
CLCN4-201ENST00000380829 RBM25P49756 843 aaKnown RBP17.55■□□□□ 0.4
CLCN4-201ENST00000380829 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
CLCN4-201ENST00000380829 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
CLCN4-201ENST00000380829 PIP4K2AP48426 406 aaPredicted RBP17.54■□□□□ 0.4
CLCN4-201ENST00000380829 PDE1AP54750 535 aa17.54■□□□□ 0.4
CLCN4-201ENST00000380829 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
CLCN4-201ENST00000380829 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
CLCN4-201ENST00000380829 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
CLCN4-201ENST00000380829 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
CLCN4-201ENST00000380829 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
CLCN4-201ENST00000380829 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
CLCN4-201ENST00000380829 EVA1CP58658 441 aa17.53■□□□□ 0.4
CLCN4-201ENST00000380829 C9orf78Q9NZ63 289 aaPredicted RBP17.52■□□□□ 0.4
CLCN4-201ENST00000380829 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.4
CLCN4-201ENST00000380829 SURF6O75683 361 aaKnown RBP17.52■□□□□ 0.4
CLCN4-201ENST00000380829 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
CLCN4-201ENST00000380829 SNRPA1P09661 255 aaKnown RBP17.52■□□□□ 0.4
CLCN4-201ENST00000380829 IL2RBP14784 551 aa17.52■□□□□ 0.4
CLCN4-201ENST00000380829 POLA2Q14181 598 aa17.52■□□□□ 0.4
CLCN4-201ENST00000380829 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
CLCN4-201ENST00000380829 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
CLCN4-201ENST00000380829 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
CLCN4-201ENST00000380829 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
CLCN4-201ENST00000380829 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 SALL3Q9BXA9 1300 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 FSD2A1L4K1 749 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 SPRYD3Q8NCJ5 442 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
CLCN4-201ENST00000380829 MX1P20591 662 aa17.5■□□□□ 0.39
CLCN4-201ENST00000380829 RIC3Q7Z5B4 369 aa17.5■□□□□ 0.39
CLCN4-201ENST00000380829 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
CLCN4-201ENST00000380829 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
CLCN4-201ENST00000380829 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
CLCN4-201ENST00000380829 KIF2CQ99661 725 aa17.49■□□□□ 0.39
CLCN4-201ENST00000380829 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 GRM8O00222 908 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 LRP10Q7Z4F1 713 aa17.47■□□□□ 0.39
CLCN4-201ENST00000380829 RAB11FIP3O75154 756 aa17.46■□□□□ 0.39
CLCN4-201ENST00000380829 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
CLCN4-201ENST00000380829 SUCLG2Q96I99 432 aa17.46■□□□□ 0.38
CLCN4-201ENST00000380829 MYD88Q99836 296 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms