RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-204ENST00000380393 BLMP54132 1417 aaPredicted RBP11.12□□□□□ -0.63
PTPRA-204ENST00000380393 SCP2P22307 547 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 SPC24Q8NBT2 197 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 DMRT2Q9Y5R5 561 aa11.12□□□□□ -0.63
PTPRA-204ENST00000380393 TMEM132EQ6IEE7 984 aa11.11□□□□□ -0.63
PTPRA-204ENST00000380393 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
PTPRA-204ENST00000380393 SYAP1Q96A49 352 aaPredicted RBP11.11□□□□□ -0.63
PTPRA-204ENST00000380393 PKP1Q13835 747 aa11.11□□□□□ -0.63
PTPRA-204ENST00000380393 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
PTPRA-204ENST00000380393 PTPRCP08575 1304 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 PUS7Q96PZ0 661 aaKnown RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 KIF2CQ99661 725 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 CLTCQ00610 1675 aaKnown RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 SLFNL1Q499Z3 407 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 PRPF38AQ8NAV1 312 aaKnown RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 TBC1D22AQ8WUA7 517 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
PTPRA-204ENST00000380393 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 DISP3Q9P2K9 1392 aa11.1□□□□□ -0.63
PTPRA-204ENST00000380393 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 TPM1P09493 284 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 AK7Q96M32 723 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 NUCKS1Q9H1E3 243 aaKnown RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 FHOD1Q9Y613 1164 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 TRPM2O94759 1503 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 EIF3CLB5ME19 914 aaKnown RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 NEBLO76041 1014 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 MNAT1P51948 309 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 EIF3CQ99613 913 aaKnown RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 CAMSAP1Q5T5Y3 1602 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 CAND2O75155 1236 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
PTPRA-204ENST00000380393 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 EXOC6BQ9Y2D4 811 aa11.09□□□□□ -0.63
PTPRA-204ENST00000380393 NOS1P29475 1434 aa11.08□□□□□ -0.64
PTPRA-204ENST00000380393 SMC2O95347 1197 aa11.08□□□□□ -0.64
PTPRA-204ENST00000380393 LMAN1P49257 510 aa11.08□□□□□ -0.64
PTPRA-204ENST00000380393 FAM210AQ96ND0 272 aa11.08□□□□□ -0.64
PTPRA-204ENST00000380393 INHBEP58166 350 aa11.08□□□□□ -0.64
PTPRA-204ENST00000380393 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 CTAGE5O15320 804 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 MAFGO15525 162 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 TPD52L1Q16890 204 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 ERO1AQ96HE7 468 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 PRAG1Q86YV5 1406 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 SYNMO15061 1565 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 FOXD4L5Q5VV16 416 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 KDM4AO75164 1064 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 CCT2P78371 535 aaKnown RBP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPRA-204ENST00000380393 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 LEKR1Q6ZMV7 388 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
PTPRA-204ENST00000380393 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
PTPRA-204ENST00000380393 CEP135Q66GS9 1140 aa11.06□□□□□ -0.64
PTPRA-204ENST00000380393 IVLP07476 585 aa11.06□□□□□ -0.64
PTPRA-204ENST00000380393 RLBP1P12271 317 aa11.06□□□□□ -0.64
PTPRA-204ENST00000380393 ZCCHC17Q9NP64 241 aaKnown RBP11.06□□□□□ -0.64
PTPRA-204ENST00000380393 ANKRD36BQ8N2N9 1353 aa11.06□□□□□ -0.64
PTPRA-204ENST00000380393 PTGS1P23219 599 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 JAKMIP3Q5VZ66 844 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 AGLP35573 1532 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 MROH2AA6NES4 1674 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 ACTN2P35609 894 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 CLCN6P51797 869 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 ARMCX6Q7L4S7 300 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 INSRP06213 1382 aa11.05□□□□□ -0.64
PTPRA-204ENST00000380393 ANKRD65E5RJM6 399 aa11.04□□□□□ -0.64
PTPRA-204ENST00000380393 OAS2P29728 719 aaKnown RBP11.04□□□□□ -0.64
PTPRA-204ENST00000380393 IRX1P78414 480 aaPredicted RBP11.04□□□□□ -0.64
PTPRA-204ENST00000380393 PDRG1Q9NUG6 133 aa11.04□□□□□ -0.64
PTPRA-204ENST00000380393 ZRSR1Q15695 479 aaKnown RBP11.04□□□□□ -0.64
PTPRA-204ENST00000380393 AP1ARQ63HQ0 302 aa11.04□□□□□ -0.64
PTPRA-204ENST00000380393 CWC22Q9HCG8 908 aaKnown RBP11.04□□□□□ -0.64
PTPRA-204ENST00000380393 ERVK-7P63135 1459 aa11.04□□□□□ -0.64
PTPRA-204ENST00000380393 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
PTPRA-204ENST00000380393 MTA1Q13330 715 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 TESK2Q96S53 571 aa11.03□□□□□ -0.64
PTPRA-204ENST00000380393 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-204ENST00000380393 SLU7O95391 586 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms