RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.02□□□□□ -1.29
DDX58-201ENST00000379868 CACNA1FO60840 1977 aa7.02□□□□□ -1.29
DDX58-201ENST00000379868 PI4KAP2A4QPH2 592 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 PI4KAP1Q8N8J0 262 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 PIGBQ92521 554 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 HYPKQ9NX55 129 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 NIP7Q9Y221 180 aaKnown RBP eCLIP7.01□□□□□ -1.29
DDX58-201ENST00000379868 CDK12Q9NYV4 1490 aaPredicted RBP7.01□□□□□ -1.29
DDX58-201ENST00000379868 ANKRD13DQ6ZTN6 518 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 SSH2Q76I76 1423 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 KDM3BQ7LBC6 1761 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 KIF24Q5T7B8 1368 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 PSDA5PKW4 1024 aaPredicted RBP7.01□□□□□ -1.29
DDX58-201ENST00000379868 FLIIQ13045 1269 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 CCDC24Q8N4L8 307 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 TSPYL6Q8N831 410 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
DDX58-201ENST00000379868 MPHOSPH8Q99549 860 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 C1orf115Q9H7X2 142 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 A0A087WZG4 1122 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 DDX19BQ9UMR2 479 aa7.01□□□□□ -1.29
DDX58-201ENST00000379868 DDX60Q8IY21 1712 aaKnown RBP7□□□□□ -1.29
DDX58-201ENST00000379868 G3BP1Q13283 466 aaKnown RBP eCLIP7□□□□□ -1.29
DDX58-201ENST00000379868 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
DDX58-201ENST00000379868 POTEAQ6S8J7 498 aa7□□□□□ -1.29
DDX58-201ENST00000379868 NEUROD6Q96NK8 337 aa7□□□□□ -1.29
DDX58-201ENST00000379868 SIL1Q9H173 461 aa7□□□□□ -1.29
DDX58-201ENST00000379868 USP16Q9Y5T5 823 aa7□□□□□ -1.29
DDX58-201ENST00000379868 RGPD8O14715 1765 aaPredicted RBP7□□□□□ -1.29
DDX58-201ENST00000379868 TRPM3Q9HCF6 1732 aaPredicted RBP7□□□□□ -1.29
DDX58-201ENST00000379868 RRP1P56182 461 aaKnown RBP7□□□□□ -1.29
DDX58-201ENST00000379868 ERICH6Q7L0X2 663 aa7□□□□□ -1.29
DDX58-201ENST00000379868 RWDD1Q9H446 243 aaPredicted RBP7□□□□□ -1.29
DDX58-201ENST00000379868 CCDC87Q9NVE4 849 aa7□□□□□ -1.29
DDX58-201ENST00000379868 MAP3K2Q9Y2U5 619 aa7□□□□□ -1.29
DDX58-201ENST00000379868 PARP3Q9Y6F1 533 aa7□□□□□ -1.29
DDX58-201ENST00000379868 GNAI3P08754 354 aa7□□□□□ -1.29
DDX58-201ENST00000379868 CCDC57Q2TAC2 916 aa7□□□□□ -1.29
DDX58-201ENST00000379868 FNBP4Q8N3X1 1017 aaPredicted RBP7□□□□□ -1.29
DDX58-201ENST00000379868 DNAAF4Q8WXU2 420 aa7□□□□□ -1.29
DDX58-201ENST00000379868 CRBNQ96SW2 442 aa7□□□□□ -1.29
DDX58-201ENST00000379868 ATF5Q9Y2D1 282 aaPredicted RBP7□□□□□ -1.29
DDX58-201ENST00000379868 ATF7IPQ6VMQ6 1270 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 RPGRQ92834 1020 aaKnown RBP6.99□□□□□ -1.29
DDX58-201ENST00000379868 GLI3P10071 1580 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 NWD1Q149M9 1564 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 OVOS2A0A0J9YW53 1432 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 OVOS2Q6IE36 1432 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 UBE3BQ7Z3V4 1068 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 UPF2Q9HAU5 1272 aaKnown RBP6.99□□□□□ -1.29
DDX58-201ENST00000379868 TXNRD1Q16881 649 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 TRIM35Q9UPQ4 493 aa6.99□□□□□ -1.29
DDX58-201ENST00000379868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.98□□□□□ -1.29
DDX58-201ENST00000379868 SURF6O75683 361 aaKnown RBP6.98□□□□□ -1.29
DDX58-201ENST00000379868 EXOC6Q8TAG9 804 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 PALLDQ8WX93 1383 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 CCT4P50991 539 aaKnown RBP6.98□□□□□ -1.29
DDX58-201ENST00000379868 BARGINQ6ZT62 677 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 PPP1R42Q7Z4L9 355 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 CPDO75976 1380 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 TRIM6-TRIM34B2RNG4 842 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 CT47B1P0C2W7 299 aaPredicted RBP6.98□□□□□ -1.29
DDX58-201ENST00000379868 ST5P78524 1137 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 PHAXQ9H814 394 aaKnown RBP6.98□□□□□ -1.29
DDX58-201ENST00000379868 ZBTB1Q9Y2K1 713 aa6.98□□□□□ -1.29
DDX58-201ENST00000379868 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 CRKLP46109 303 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 ANKRD45Q5TZF3 282 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 CHL1O00533 1208 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 RARSP54136 660 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 EIF4A1P60842 406 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 R3HDM1Q15032 1099 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 GPATCH3Q96I76 525 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 DDX21Q9NR30 783 aaKnown RBP eCLIP6.97□□□□□ -1.29
DDX58-201ENST00000379868 CWC25Q9NXE8 425 aaPredicted RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 IL16Q14005 1332 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 GNAI2P04899 355 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 IGHMBP2P38935 993 aaKnown RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 SPINK5Q9NQ38 1064 aaPredicted RBP6.97□□□□□ -1.29
DDX58-201ENST00000379868 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 TAOK2Q9UL54 1235 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 ABCC6O95255 1503 aa6.97□□□□□ -1.29
DDX58-201ENST00000379868 PRAMEF22A3QJZ6 481 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 SRGAP3O43295 1099 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 CCDC27Q2M243 656 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 SMIM5Q71RC9 77 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 NLRP3Q96P20 1036 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 COL22A1Q8NFW1 1626 aaPredicted RBP6.96□□□□□ -1.29
DDX58-201ENST00000379868 GIGYF1O75420 1035 aaPredicted RBP6.96□□□□□ -1.29
DDX58-201ENST00000379868 IFIT2P09913 472 aaKnown RBP6.96□□□□□ -1.29
DDX58-201ENST00000379868 CNBD1Q8NA66 436 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 ANKIB1Q9P2G1 1089 aa6.96□□□□□ -1.29
DDX58-201ENST00000379868 OVOS2A0A0G2JMS6 1433 aa6.96□□□□□ -1.3
DDX58-201ENST00000379868 C6orf229H3BNL8 230 aa6.96□□□□□ -1.3
DDX58-201ENST00000379868 CASC1Q6TDU7 716 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms