RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 HSP90AA2PQ14568 343 aaPredicted RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 ATP10DQ9P241 1426 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■■□□ 16
GPCPD1-201ENST00000379019 MIS18AQ9NYP9 233 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 TNS1Q9HBL0 1735 aaKnown RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 ERBB3P21860 1342 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 BRWD3Q6RI45 1802 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 U2SURPO15042 1029 aaKnown RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 BAG6P46379 1132 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 NAA30Q147X3 362 aaPredicted RBP9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
GPCPD1-201ENST00000379019 CHD1LQ86WJ1 897 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 CABLES1Q8TDN4 633 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 ZBTB22O15209 634 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 VAMP4O75379 141 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 RREB1Q92766 1687 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 RNF214Q8ND24 703 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 CHMP5Q9NZZ3 219 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 CAVIN1Q6NZI2 390 aaKnown RBP9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 PLEKHM2Q8IWE5 1019 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 PKD1L3Q7Z443 1732 aa9.17□□□□□ -0.94
GPCPD1-201ENST00000379019 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
GPCPD1-201ENST00000379019 ZHX1Q9UKY1 873 aaPredicted RBP9.16□□□□□ -0.94
GPCPD1-201ENST00000379019 ZSCAN23Q3MJ62 389 aa9.16□□□□□ -0.94
GPCPD1-201ENST00000379019 NME9Q86XW9 330 aa9.16□□□□□ -0.94
GPCPD1-201ENST00000379019 TOM1L2Q6ZVM7 507 aa9.16□□□□□ -0.94
GPCPD1-201ENST00000379019 ZC3H6P61129 1189 aaKnown RBP9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 AMPHP49418 695 aa9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 MYH16Q9H6N6 1097 aa9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 IL2RBP14784 551 aa9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 HOXC9P31274 260 aa9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.94
GPCPD1-201ENST00000379019 ATP2B3Q16720 1220 aa9.15□□□□□ -0.95
GPCPD1-201ENST00000379019 ZKSCAN2Q63HK3 967 aa9.15□□□□□ -0.95
GPCPD1-201ENST00000379019 MCTP1Q6DN14 999 aa9.15□□□□□ -0.95
GPCPD1-201ENST00000379019 CSB-PGBD3P0DP91 1061 aa9.15□□□□□ -0.95
GPCPD1-201ENST00000379019 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.95
GPCPD1-201ENST00000379019 LRP5O75197 1615 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 CHGBP05060 677 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 G2E3Q7L622 706 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 MBIPQ9NS73 344 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 QSER1Q2KHR3 1735 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 CPA1P15085 419 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 DDB1Q16531 1140 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 XIRP2A4UGR9 3374 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 ZNF831Q5JPB2 1677 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 EXOC5O00471 708 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 MRE11P49959 708 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 R3HCC1Q9Y3T6 440 aaKnown RBP9.14□□□□□ -0.95
GPCPD1-201ENST00000379019 SYCE3A1L190 88 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 HSP90AB1P08238 724 aaKnown RBP9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 POLKQ9UBT6 870 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 TAF6LQ9Y6J9 622 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 MAP3K19Q56UN5 1328 aa9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
GPCPD1-201ENST00000379019 PLSCR1O15162 318 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 STRN4Q9NRL3 753 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 VCANP13611 3396 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 DNAH12Q6ZR08 3092 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 F6X3S4 739 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 MEIS3Q99687 375 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 A0A087WWV3 80 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 PRKAR2BP31323 418 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
GPCPD1-201ENST00000379019 PRPF40AO75400 957 aaKnown RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 CHRNA2Q15822 529 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 PCDH11XQ9BZA7 1347 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 PCDH11YQ9BZA8 1340 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 SDSP20132 328 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 FTSJ3Q8IY81 847 aaKnown RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 CICQ96RK0 1608 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 TATP17735 454 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 SNX21Q969T3 373 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 SPG7Q9UQ90 795 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 AMOTQ4VCS5 1084 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 LARGE1O95461 756 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 ZSCAN20P17040 1043 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 NASPP49321 788 aaPredicted RBP9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 ST3GAL1Q11201 340 aa9.11□□□□□ -0.95
GPCPD1-201ENST00000379019 SBF2Q86WG5 1849 aa9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 NUTM2GQ5VZR2 741 aa9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 RWDD1Q9H446 243 aaPredicted RBP9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms