RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ANKIB1Q9P2G1 1089 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 CEP112Q8N8E3 955 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
HIPK3-202ENST00000379016 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
HIPK3-202ENST00000379016 NAA15Q9BXJ9 866 aaKnown RBP15.32■□□□□ 0.04
HIPK3-202ENST00000379016 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
HIPK3-202ENST00000379016 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
HIPK3-202ENST00000379016 TMEM110-MUSTN1A8MSY1 372 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 GSTA5Q7RTV2 222 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 RAB3GAP2Q9H2M9 1393 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 CGNQ9P2M7 1197 aaKnown RBP15.31■□□□□ 0.04
HIPK3-202ENST00000379016 KIF4AO95239 1232 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 TRMT1Q9NXH9 659 aaKnown RBP15.31■□□□□ 0.04
HIPK3-202ENST00000379016 SARNPP82979 210 aaKnown RBP15.31■□□□□ 0.04
HIPK3-202ENST00000379016 PPP2R5CQ13362 524 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
HIPK3-202ENST00000379016 GNAI1P63096 354 aa15.3■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC174Q6PII3 467 aa15.3■□□□□ 0.04
HIPK3-202ENST00000379016 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
HIPK3-202ENST00000379016 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
HIPK3-202ENST00000379016 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
HIPK3-202ENST00000379016 MCM2P49736 904 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 PSMD6Q15008 389 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 HSPA4P34932 840 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 RBM28Q9NW13 759 aaKnown RBP15.29■□□□□ 0.04
HIPK3-202ENST00000379016 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
HIPK3-202ENST00000379016 KIAA0753Q2KHM9 967 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 TXNDC16Q9P2K2 825 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 CARMIL2Q6F5E8 1435 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 TMEM266Q2M3C6 531 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 VAT1LQ9HCJ6 419 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 CFAP157Q5JU67 520 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
HIPK3-202ENST00000379016 WASF1Q92558 559 aa15.29■□□□□ 0.04
HIPK3-202ENST00000379016 HSF2BPO75031 334 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 PHACTR2O75167 634 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
HIPK3-202ENST00000379016 GUCY1B3Q02153 619 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 PPP4R4Q6NUP7 873 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 ZNF710Q8N1W2 664 aa15.28■□□□□ 0.04
HIPK3-202ENST00000379016 ARID4AP29374 1257 aaPredicted RBP15.28■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC40Q4G0X9 1142 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 BLOC1S2Q6QNY1 142 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 CCDC117Q8IWD4 279 aaPredicted RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 GTF2A1P52655 376 aaPredicted RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 MSL1Q68DK7 614 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 AIDAQ96BJ3 306 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 RIOK3O14730 519 aaKnown RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 PRR16Q569H4 304 aa15.27■□□□□ 0.04
HIPK3-202ENST00000379016 ZNF444Q8N0Y2 327 aaPredicted RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 JAKMIP1Q96N16 626 aaKnown RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 CACYBPQ9HB71 228 aaKnown RBP15.27■□□□□ 0.04
HIPK3-202ENST00000379016 SMIM23A6NLE4 172 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 ZSCAN12O43309 604 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 GNAI2P04899 355 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 C16orf71Q8IYS4 520 aaPredicted RBP15.27■□□□□ 0.03
HIPK3-202ENST00000379016 LRRC43Q8N309 656 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 SWAP70Q9UH65 585 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 RASA3Q14644 834 aa15.27■□□□□ 0.03
HIPK3-202ENST00000379016 WDR33Q9C0J8 1336 aaKnown RBP15.27■□□□□ 0.03
HIPK3-202ENST00000379016 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.03
HIPK3-202ENST00000379016 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.03
HIPK3-202ENST00000379016 STX6O43752 255 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 AACSQ86V21 672 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 ATP6V1E1P36543 226 aa15.26■□□□□ 0.03
HIPK3-202ENST00000379016 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
HIPK3-202ENST00000379016 RAB34Q9BZG1 259 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
HIPK3-202ENST00000379016 SFPQP23246 707 aaKnown RBP eCLIP15.25■□□□□ 0.03
HIPK3-202ENST00000379016 CKAP4Q07065 602 aaKnown RBP15.25■□□□□ 0.03
HIPK3-202ENST00000379016 GNAI3P08754 354 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 GABPAQ06546 454 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 ISM2Q6H9L7 571 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 SELENOSQ9BQE4 189 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 SOGA1O94964 1423 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 EEF2P13639 858 aaKnown RBP15.25■□□□□ 0.03
HIPK3-202ENST00000379016 KRT13P13646 458 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 GNL1P36915 607 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms