RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 MCCP23508 829 aa13.16□□□□□ -0.3
PCDHGA1-201ENST00000378105 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
PCDHGA1-201ENST00000378105 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 GNAI1P63096 354 aa13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 ZSCAN30Q86W11 494 aa13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA1-201ENST00000378105 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 DCTN1Q14203 1278 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 PRPF38AQ8NAV1 312 aaKnown RBP13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
PCDHGA1-201ENST00000378105 GEMIN8Q9NWZ8 242 aaKnown RBP13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 ITGB4P16144 1822 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 TRAK2O60296 914 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 ANAPC15P60006 121 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 CASC1Q6TDU7 716 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
PCDHGA1-201ENST00000378105 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 C5P01031 1676 aa13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
PCDHGA1-201ENST00000378105 LRP6O75581 1613 aa13.11□□□□□ -0.31
PCDHGA1-201ENST00000378105 GAS2L2Q8NHY3 880 aa13.11□□□□□ -0.31
PCDHGA1-201ENST00000378105 FYB1O15117 783 aa13.1□□□□□ -0.31
PCDHGA1-201ENST00000378105 GYS2P54840 703 aa13.1□□□□□ -0.31
PCDHGA1-201ENST00000378105 BECN1Q14457 450 aa13.1□□□□□ -0.31
PCDHGA1-201ENST00000378105 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
PCDHGA1-201ENST00000378105 MCM10Q7L590 875 aa13.1□□□□□ -0.31
PCDHGA1-201ENST00000378105 BCAR3O75815 825 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 GAS2L3Q86XJ1 694 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 DZIP1LQ8IYY4 767 aaKnown RBP13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 RGPD3A6NKT7 1758 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 RGPD4Q7Z3J3 1758 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 LY75O60449 1722 aa13.09□□□□□ -0.31
PCDHGA1-201ENST00000378105 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.31
PCDHGA1-201ENST00000378105 GORABQ5T7V8 394 aa13.08□□□□□ -0.31
PCDHGA1-201ENST00000378105 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 PARD3Q8TEW0 1356 aa13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 SART3Q15020 963 aaKnown RBP13.08□□□□□ -0.32
PCDHGA1-201ENST00000378105 HMMRO75330 724 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 SGSM3Q96HU1 749 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 CEP83Q9Y592 693 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
PCDHGA1-201ENST00000378105 ANKRD45Q5TZF3 282 aa13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 COL14A1Q05707 1796 aaKnown RBP13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 TTC21BQ7Z4L5 1316 aa13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 FCHSD2O94868 740 aa13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 MYCBPQ99417 103 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA1-201ENST00000378105 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 DRC1Q96MC2 740 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 MSH6P52701 1360 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 TDO2P48775 406 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 ZNF646O15015 1829 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 BIRC2Q13490 618 aa13.05□□□□□ -0.32
PCDHGA1-201ENST00000378105 ARMCX6Q7L4S7 300 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 CABP4P57796 275 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 TJP1Q07157 1748 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
PCDHGA1-201ENST00000378105 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 MCM4P33991 863 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
PCDHGA1-201ENST00000378105 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms