RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 VIRMAQ69YN4 1812 aaKnown RBP23.69■■□□□ 1.38
IRF3-202ENST00000377135 TJP1Q07157 1748 aa23.69■■□□□ 1.38
IRF3-202ENST00000377135 PNNQ9H307 717 aaKnown RBP23.68■■□□□ 1.38
IRF3-202ENST00000377135 HEG1Q9ULI3 1381 aa23.68■■□□□ 1.38
IRF3-202ENST00000377135 A0A0G2JLW4 131 aa23.67■■□□□ 1.38
IRF3-202ENST00000377135 TM4SF1P30408 202 aa23.67■■□□□ 1.38
IRF3-202ENST00000377135 NARFQ9UHQ1 456 aa23.67■■□□□ 1.38
IRF3-202ENST00000377135 CHD4Q14839 1912 aa23.66■■□□□ 1.38
IRF3-202ENST00000377135 PLEKHF1Q96S99 279 aa23.66■■□□□ 1.38
IRF3-202ENST00000377135 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
IRF3-202ENST00000377135 TAF7Q15545 349 aaPredicted RBP23.65■■□□□ 1.38
IRF3-202ENST00000377135 A0A087WZG4 1122 aa23.64■■□□□ 1.37
IRF3-202ENST00000377135 DDR1Q08345 913 aa23.64■■□□□ 1.37
IRF3-202ENST00000377135 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.37
IRF3-202ENST00000377135 A1BGP04217 495 aa23.63■■□□□ 1.37
IRF3-202ENST00000377135 COL15A1P39059 1388 aa23.63■■□□□ 1.37
IRF3-202ENST00000377135 DPEP1P16444 411 aa23.62■■□□□ 1.37
IRF3-202ENST00000377135 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
IRF3-202ENST00000377135 ZNF330Q9Y3S2 320 aaPredicted RBP23.62■■□□□ 1.37
IRF3-202ENST00000377135 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
IRF3-202ENST00000377135 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
IRF3-202ENST00000377135 NFIXQ14938 502 aa23.61■■□□□ 1.37
IRF3-202ENST00000377135 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
IRF3-202ENST00000377135 BCL2L12Q9HB09 334 aa23.61■■□□□ 1.37
IRF3-202ENST00000377135 MIS18AQ9NYP9 233 aa23.61■■□□□ 1.37
IRF3-202ENST00000377135 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
IRF3-202ENST00000377135 IL6STP40189 918 aaPredicted RBP23.6■■□□□ 1.37
IRF3-202ENST00000377135 MAPK8IP3Q9UPT6 1336 aa23.6■■□□□ 1.37
IRF3-202ENST00000377135 C4AP0C0L4 1744 aa23.6■■□□□ 1.37
IRF3-202ENST00000377135 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
IRF3-202ENST00000377135 BCS1LQ9Y276 419 aa23.59■■□□□ 1.37
IRF3-202ENST00000377135 UBR2Q8IWV8 1755 aa23.59■■□□□ 1.37
IRF3-202ENST00000377135 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.37
IRF3-202ENST00000377135 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
IRF3-202ENST00000377135 SIPA1L3O60292 1781 aaPredicted RBP23.58■■□□□ 1.37
IRF3-202ENST00000377135 PRAMEF22A3QJZ6 481 aa23.58■■□□□ 1.36
IRF3-202ENST00000377135 SERPINB2P05120 415 aa23.57■■□□□ 1.36
IRF3-202ENST00000377135 KCNA3P22001 575 aa23.57■■□□□ 1.36
IRF3-202ENST00000377135 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
IRF3-202ENST00000377135 PNISRQ8TF01 805 aaKnown RBP23.57■■□□□ 1.36
IRF3-202ENST00000377135 PIM2Q9P1W9 311 aa23.57■■□□□ 1.36
IRF3-202ENST00000377135 PXDNLA1KZ92 1463 aa23.57■■□□□ 1.36
IRF3-202ENST00000377135 ZEB1P37275 1124 aaPredicted RBP23.56■■□□□ 1.36
IRF3-202ENST00000377135 THUMPD2Q9BTF0 503 aaKnown RBP23.55■■□□□ 1.36
IRF3-202ENST00000377135 PIP4K2AP48426 406 aaPredicted RBP23.54■■□□□ 1.36
IRF3-202ENST00000377135 CHRNA5P30532 468 aa23.53■■□□□ 1.36
IRF3-202ENST00000377135 RIPK4P57078 832 aa23.53■■□□□ 1.36
IRF3-202ENST00000377135 ARHGAP27Q6ZUM4 889 aa23.53■■□□□ 1.36
IRF3-202ENST00000377135 TBC1D9BQ66K14 1250 aa23.52■■□□□ 1.36
IRF3-202ENST00000377135 KIF13BQ9NQT8 1826 aa23.52■■□□□ 1.36
IRF3-202ENST00000377135 DALRD3Q5D0E6 543 aaKnown RBP23.51■■□□□ 1.35
IRF3-202ENST00000377135 DZIP3Q86Y13 1208 aaKnown RBP23.51■■□□□ 1.35
IRF3-202ENST00000377135 PRKRIP1Q9H875 184 aaPredicted RBP23.5■■□□□ 1.35
IRF3-202ENST00000377135 N4BP2Q86UW6 1770 aaPredicted RBP23.5■■□□□ 1.35
IRF3-202ENST00000377135 CAMTA2O94983 1202 aa23.5■■□□□ 1.35
IRF3-202ENST00000377135 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
IRF3-202ENST00000377135 SETDB2Q96T68 719 aa23.5■■□□□ 1.35
IRF3-202ENST00000377135 NBPF26B4DH59 902 aa23.49■■□□□ 1.35
IRF3-202ENST00000377135 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
IRF3-202ENST00000377135 NBPF10Q6P3W6 841 aaKnown RBP23.49■■□□□ 1.35
IRF3-202ENST00000377135 NBPF15Q8N660 670 aa23.49■■□□□ 1.35
IRF3-202ENST00000377135 GIGYF1O75420 1035 aaPredicted RBP23.48■■□□□ 1.35
IRF3-202ENST00000377135 EIF4A1P60842 406 aaKnown RBP23.48■■□□□ 1.35
IRF3-202ENST00000377135 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
IRF3-202ENST00000377135 ADAMTS8Q9UP79 889 aa23.47■■□□□ 1.35
IRF3-202ENST00000377135 NEUROD2Q15784 382 aa23.46■■□□□ 1.35
IRF3-202ENST00000377135 RRP7AQ9Y3A4 280 aaKnown RBP23.46■■□□□ 1.35
IRF3-202ENST00000377135 H0YIN7 160 aa23.45■■□□□ 1.34
IRF3-202ENST00000377135 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.34
IRF3-202ENST00000377135 C2CD5Q86YS7 1000 aa23.45■■□□□ 1.34
IRF3-202ENST00000377135 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
IRF3-202ENST00000377135 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
IRF3-202ENST00000377135 DLG5Q8TDM6 1919 aa23.44■■□□□ 1.34
IRF3-202ENST00000377135 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
IRF3-202ENST00000377135 TSPYL4Q9UJ04 414 aa23.44■■□□□ 1.34
IRF3-202ENST00000377135 NPHP1O15259 732 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 CCDC24Q8N4L8 307 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 NGEFQ8N5V2 710 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 ZNF526Q8TF50 670 aaPredicted RBP23.43■■□□□ 1.34
IRF3-202ENST00000377135 BRIP1Q9BX63 1249 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 GPBP1L1Q9HC44 474 aaPredicted RBP23.43■■□□□ 1.34
IRF3-202ENST00000377135 ZNF652Q9Y2D9 606 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
IRF3-202ENST00000377135 C1QTNF8P60827 252 aa23.42■■□□□ 1.34
IRF3-202ENST00000377135 PRR5LQ6MZQ0 368 aa23.42■■□□□ 1.34
IRF3-202ENST00000377135 PDE6BP35913 854 aa23.42■■□□□ 1.34
IRF3-202ENST00000377135 TTLL6Q8N841 843 aa23.42■■□□□ 1.34
IRF3-202ENST00000377135 CARMIL3Q8ND23 1372 aa23.41■■□□□ 1.34
IRF3-202ENST00000377135 BABAM1Q9NWV8 329 aa23.41■■□□□ 1.34
IRF3-202ENST00000377135 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
IRF3-202ENST00000377135 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
IRF3-202ENST00000377135 AFDNP55196 1824 aaKnown RBP23.4■■□□□ 1.34
IRF3-202ENST00000377135 ZNF622Q969S3 477 aaKnown RBP eCLIP23.39■■□□□ 1.33
IRF3-202ENST00000377135 ADCY9O60503 1353 aa23.39■■□□□ 1.33
IRF3-202ENST00000377135 RGL2O15211 777 aa23.38■■□□□ 1.33
IRF3-202ENST00000377135 MYL6BP14649 208 aa23.38■■□□□ 1.33
IRF3-202ENST00000377135 NBPF5PQ86XG9 351 aaPredicted RBP23.38■■□□□ 1.33
IRF3-202ENST00000377135 NIP7Q9Y221 180 aaKnown RBP eCLIP23.38■■□□□ 1.33
IRF3-202ENST00000377135 ST5P78524 1137 aa23.37■■□□□ 1.33
IRF3-202ENST00000377135 HLFQ16534 295 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms