RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 CCDC83Q8IWF9 413 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 ZNF215Q9UL58 517 aaPredicted RBP22.77■■□□□ 1.24
GPC5-201ENST00000377067 PAXBP1Q9Y5B6 917 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 NPATQ14207 1427 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 ABCC3O15438 1527 aa22.77■■□□□ 1.24
GPC5-201ENST00000377067 LIG1P18858 919 aa22.77■■□□□ 1.23
GPC5-201ENST00000377067 CACTINQ8WUQ7 758 aaKnown RBP22.77■■□□□ 1.23
GPC5-201ENST00000377067 RTF1Q92541 710 aaKnown RBP22.77■■□□□ 1.23
GPC5-201ENST00000377067 CBX8Q9HC52 389 aa22.77■■□□□ 1.23
GPC5-201ENST00000377067 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
GPC5-201ENST00000377067 CEP135Q66GS9 1140 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 MTMR6Q9Y217 621 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 GJB2P29033 226 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 MAP3K11Q16584 847 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 ANO6Q4KMQ2 910 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 G2E3Q7L622 706 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 RASEFQ8IZ41 740 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.76■■□□□ 1.23
GPC5-201ENST00000377067 SNX14Q9Y5W7 946 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 ANKRD26Q9UPS8 1709 aa22.76■■□□□ 1.23
GPC5-201ENST00000377067 ZNF397Q8NF99 534 aaPredicted RBP22.75■■□□□ 1.23
GPC5-201ENST00000377067 FAM173BQ6P4H8 233 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 TTC14Q96N46 770 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 NUP62CLQ9H1M0 184 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 LIMCH1Q9UPQ0 1083 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 KIAA0232Q92628 1395 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 SSH2Q76I76 1423 aa22.75■■□□□ 1.23
GPC5-201ENST00000377067 NPHP1O15259 732 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 ZNF75DP51815 510 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 CCDC144BQ3MJ40 725 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 PNMA6EA0A0J9YXQ4 647 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 FBXO38Q6PIJ6 1188 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 MCM10Q7L590 875 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 CDK19Q9BWU1 502 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
GPC5-201ENST00000377067 ELF2Q15723 593 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 IL17RAQ96F46 866 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 IL1RAPL2Q9NP60 686 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 PTPRCP08575 1304 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 TTC6Q86TZ1 520 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 FERMT3Q86UX7 667 aa22.73■■□□□ 1.23
GPC5-201ENST00000377067 ARID5BQ14865 1188 aa22.72■■□□□ 1.23
GPC5-201ENST00000377067 RBM6P78332 1123 aaKnown RBP22.72■■□□□ 1.23
GPC5-201ENST00000377067 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 CLIP2Q9UDT6 1046 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 GNAI2P04899 355 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 CAPN2P17655 700 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
GPC5-201ENST00000377067 PLA2G4DQ86XP0 818 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 NUTM1Q86Y26 1132 aa22.71■■□□□ 1.23
GPC5-201ENST00000377067 DDX54Q8TDD1 881 aaKnown RBP22.71■■□□□ 1.23
GPC5-201ENST00000377067 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.23
GPC5-201ENST00000377067 RAD50Q92878 1312 aa22.7■■□□□ 1.22
GPC5-201ENST00000377067 TNMDQ9H2S6 317 aa22.7■■□□□ 1.22
GPC5-201ENST00000377067 DACT1Q9NYF0 836 aa22.7■■□□□ 1.22
GPC5-201ENST00000377067 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
GPC5-201ENST00000377067 CASTP20810 708 aaKnown RBP22.69■■□□□ 1.22
GPC5-201ENST00000377067 UHRF1BP1LA0JNW5 1464 aa22.69■■□□□ 1.22
GPC5-201ENST00000377067 CPSF1Q10570 1443 aaKnown RBP22.69■■□□□ 1.22
GPC5-201ENST00000377067 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
GPC5-201ENST00000377067 TRMT1Q9NXH9 659 aaKnown RBP22.68■■□□□ 1.22
GPC5-201ENST00000377067 CALCOCO1Q9P1Z2 691 aa22.68■■□□□ 1.22
GPC5-201ENST00000377067 NME9Q86XW9 330 aa22.68■■□□□ 1.22
GPC5-201ENST00000377067 DNAJC25Q9H1X3 360 aa22.68■■□□□ 1.22
GPC5-201ENST00000377067 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
GPC5-201ENST00000377067 SPG7Q9UQ90 795 aa22.67■■□□□ 1.22
GPC5-201ENST00000377067 CHL1O00533 1208 aa22.67■■□□□ 1.22
GPC5-201ENST00000377067 STAP2Q9UGK3 403 aa22.67■■□□□ 1.22
GPC5-201ENST00000377067 PTPN14Q15678 1187 aa22.66■■□□□ 1.22
GPC5-201ENST00000377067 ZNF446Q9NWS9 450 aa22.66■■□□□ 1.22
GPC5-201ENST00000377067 HAP1P54257 671 aaPredicted RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 FAM53CQ9NYF3 392 aa22.65■■□□□ 1.22
GPC5-201ENST00000377067 SGSM2O43147 1006 aa22.65■■□□□ 1.22
GPC5-201ENST00000377067 ZNF165P49910 485 aa22.65■■□□□ 1.22
GPC5-201ENST00000377067 GTF3C6Q969F1 213 aa22.65■■□□□ 1.22
GPC5-201ENST00000377067 DNAJC2Q99543 621 aaKnown RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 LSG1Q9H089 658 aaKnown RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 HYPKQ9NX55 129 aa22.65■■□□□ 1.22
GPC5-201ENST00000377067 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 MAP2P11137 1827 aaKnown RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
GPC5-201ENST00000377067 ASXL2Q76L83 1435 aa22.64■■□□□ 1.22
GPC5-201ENST00000377067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.64■■□□□ 1.22
GPC5-201ENST00000377067 KRT85P78386 507 aa22.64■■□□□ 1.22
GPC5-201ENST00000377067 ST3GAL1Q11201 340 aa22.64■■□□□ 1.22
GPC5-201ENST00000377067 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.22
GPC5-201ENST00000377067 ERBB3P21860 1342 aa22.64■■□□□ 1.21
GPC5-201ENST00000377067 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.21
GPC5-201ENST00000377067 CWC27Q6UX04 472 aaKnown RBP22.64■■□□□ 1.21
GPC5-201ENST00000377067 CDC37L1Q7L3B6 337 aa22.64■■□□□ 1.21
GPC5-201ENST00000377067 TDRD7Q8NHU6 1098 aaKnown RBP22.64■■□□□ 1.21
GPC5-201ENST00000377067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.63■■□□□ 1.21
GPC5-201ENST00000377067 TRIM34Q9BYJ4 488 aa22.63■■□□□ 1.21
GPC5-201ENST00000377067 GOLGA6L4A6NEF3 574 aa22.63■■□□□ 1.21
GPC5-201ENST00000377067 LRRC8AQ8IWT6 810 aa22.63■■□□□ 1.21
GPC5-201ENST00000377067 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms