RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 FAM135BQ49AJ0 1406 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 FAM184AQ8NB25 1140 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 KCNH5Q8NCM2 988 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 PTPRMP28827 1452 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 VWDEQ8N2E2 1590 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 CHMLP26374 656 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
DDR1-226ENST00000376569 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
DDR1-226ENST00000376569 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 FAM43AQ8N2R8 423 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
DDR1-226ENST00000376569 SHPRHQ149N8 1683 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 A0A087WZG4 1122 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 CAMK4Q16566 473 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
DDR1-226ENST00000376569 MROH1Q8NDA8 1641 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 ESPNB1AK53 854 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
DDR1-226ENST00000376569 SYAP1Q96A49 352 aaPredicted RBP15.24■□□□□ 0.03
DDR1-226ENST00000376569 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 FAM173BQ6P4H8 233 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
DDR1-226ENST00000376569 SPC24Q8NBT2 197 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 NEXMIFQ5QGS0 1516 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
DDR1-226ENST00000376569 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 SNX21Q969T3 373 aa15.23■□□□□ 0.03
DDR1-226ENST00000376569 R3HCC1Q9Y3T6 440 aaKnown RBP15.23■□□□□ 0.03
DDR1-226ENST00000376569 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 MAP3K5Q99683 1374 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 GPTP24298 496 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
DDR1-226ENST00000376569 PTMSP20962 102 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
DDR1-226ENST00000376569 CYP46A1Q9Y6A2 500 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 IP6K1Q92551 441 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
DDR1-226ENST00000376569 CPS1P31327 1500 aa15.21■□□□□ 0.03
DDR1-226ENST00000376569 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.03
DDR1-226ENST00000376569 HSP90AB3PQ58FF7 597 aa15.21■□□□□ 0.03
DDR1-226ENST00000376569 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
DDR1-226ENST00000376569 SBNO1A3KN83 1393 aa15.21■□□□□ 0.03
DDR1-226ENST00000376569 GLRX3O76003 335 aaKnown RBP15.21■□□□□ 0.02
DDR1-226ENST00000376569 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.02
DDR1-226ENST00000376569 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.02
DDR1-226ENST00000376569 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.02
DDR1-226ENST00000376569 BICC1Q9H694 974 aaKnown RBP15.2■□□□□ 0.02
DDR1-226ENST00000376569 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 DIP2CQ9Y2E4 1556 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 FAM227BQ96M60 508 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 ECHDC1Q9NTX5 307 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 CHST3Q7LGC8 479 aa15.2■□□□□ 0.02
DDR1-226ENST00000376569 CWC22Q9HCG8 908 aaKnown RBP15.2■□□□□ 0.02
DDR1-226ENST00000376569 ARHGEF40Q8TER5 1519 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 EIF4A1P60842 406 aaKnown RBP15.19■□□□□ 0.02
DDR1-226ENST00000376569 ZNF830Q96NB3 372 aaPredicted RBP15.19■□□□□ 0.02
DDR1-226ENST00000376569 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 USP6P35125 1406 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 RNMTO43148 476 aaKnown RBP15.19■□□□□ 0.02
DDR1-226ENST00000376569 KIF2CQ99661 725 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 USP16Q9Y5T5 823 aa15.19■□□□□ 0.02
DDR1-226ENST00000376569 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 AXIN2Q9Y2T1 843 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 GRM8O00222 908 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 HAND2P61296 217 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
DDR1-226ENST00000376569 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
DDR1-226ENST00000376569 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
DDR1-226ENST00000376569 AK2P54819 239 aa15.17■□□□□ 0.02
DDR1-226ENST00000376569 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
DDR1-226ENST00000376569 SF3A1Q15459 793 aaKnown RBP15.17■□□□□ 0.02
DDR1-226ENST00000376569 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
DDR1-226ENST00000376569 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
DDR1-226ENST00000376569 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.17■□□□□ 0.02
DDR1-226ENST00000376569 GOLIM4O00461 696 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 MYO3AQ8NEV4 1616 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 ATP2B1P20020 1258 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 GTF2E1P29083 439 aaPredicted RBP15.16■□□□□ 0.02
DDR1-226ENST00000376569 TIMM10P62072 90 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
DDR1-226ENST00000376569 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 SUCLG2Q96I99 432 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
DDR1-226ENST00000376569 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms