RNA–Protein interactions for RNA: ENST00000375726.6

CASP12-201, Transcript of caspase 12 (gene/pseudogene), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CASP12, Length 1,306 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP12-201ENST00000375726 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
CASP12-201ENST00000375726 THRAP3Q9Y2W1 955 aaKnown RBP10.09□□□□□ -0.79
CASP12-201ENST00000375726 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
CASP12-201ENST00000375726 PCDH11XQ9BZA7 1347 aa10.09□□□□□ -0.79
CASP12-201ENST00000375726 PCDH11YQ9BZA8 1340 aa10.09□□□□□ -0.79
CASP12-201ENST00000375726 SHANK3Q9BYB0 1731 aa10.09□□□□□ -0.79
CASP12-201ENST00000375726 TNS2Q63HR2 1409 aa10.09□□□□□ -0.79
CASP12-201ENST00000375726 SCN11AQ9UI33 1791 aa10.08□□□□□ -0.8
CASP12-201ENST00000375726 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
CASP12-201ENST00000375726 RIPK4P57078 832 aa10.08□□□□□ -0.8
CASP12-201ENST00000375726 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
CASP12-201ENST00000375726 MFSD10Q14728 455 aa10.08□□□□□ -0.8
CASP12-201ENST00000375726 ZNF530Q6P9A1 599 aaPredicted RBP10.08□□□□□ -0.8
CASP12-201ENST00000375726 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
CASP12-201ENST00000375726 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
CASP12-201ENST00000375726 BCL9LQ86UU0 1499 aa10.08□□□□□ -0.8
CASP12-201ENST00000375726 A0A0G2JS52 829 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 MYT1Q01538 1121 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 VPS72Q15906 364 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
CASP12-201ENST00000375726 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
CASP12-201ENST00000375726 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 GNAT3A8MTJ3 354 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 ZNF772Q68DY9 489 aaPredicted RBP10.07□□□□□ -0.8
CASP12-201ENST00000375726 PHACTR3Q96KR7 559 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 TRPC5Q9UL62 973 aaPredicted RBP10.07□□□□□ -0.8
CASP12-201ENST00000375726 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
CASP12-201ENST00000375726 THSD7AQ9UPZ6 1657 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 ADAMTS7Q9UKP4 1686 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 GLI3P10071 1580 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 ATRNO75882 1429 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 SENP3-EIF4A1A0A087X0R7 540 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
CASP12-201ENST00000375726 HSP90AB1P08238 724 aaKnown RBP10.06□□□□□ -0.8
CASP12-201ENST00000375726 MTHFSDQ2M296 383 aaKnown RBP10.06□□□□□ -0.8
CASP12-201ENST00000375726 AKAP4Q5JQC9 854 aa10.06□□□□□ -0.8
CASP12-201ENST00000375726 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
CASP12-201ENST00000375726 DOT1LQ8TEK3 1739 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 BARGINQ6ZT62 677 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
CASP12-201ENST00000375726 SIPA1L3O60292 1781 aaPredicted RBP10.04□□□□□ -0.8
CASP12-201ENST00000375726 IL16Q14005 1332 aa10.04□□□□□ -0.8
CASP12-201ENST00000375726 E9PSI1 815 aa10.04□□□□□ -0.8
CASP12-201ENST00000375726 TEFQ10587 303 aa10.04□□□□□ -0.8
CASP12-201ENST00000375726 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
CASP12-201ENST00000375726 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
CASP12-201ENST00000375726 MRC1P22897 1456 aa10.03□□□□□ -0.8
CASP12-201ENST00000375726 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
CASP12-201ENST00000375726 NUDT7P0C024 238 aa10.03□□□□□ -0.8
CASP12-201ENST00000375726 DDB1Q16531 1140 aa10.03□□□□□ -0.8
CASP12-201ENST00000375726 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
CASP12-201ENST00000375726 KDM3BQ7LBC6 1761 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 EXOC5O00471 708 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 PHKG2P15735 406 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 GNAI1P63096 354 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
CASP12-201ENST00000375726 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 DCAF5Q96JK2 942 aa10.02□□□□□ -0.81
CASP12-201ENST00000375726 LAS1LQ9Y4W2 734 aaKnown RBP10.02□□□□□ -0.81
CASP12-201ENST00000375726 TOGARAM1Q9Y4F4 1720 aa10.01□□□□□ -0.81
CASP12-201ENST00000375726 MCM10Q7L590 875 aa10.01□□□□□ -0.81
CASP12-201ENST00000375726 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
CASP12-201ENST00000375726 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
CASP12-201ENST00000375726 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
CASP12-201ENST00000375726 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
CASP12-201ENST00000375726 IFT57Q9NWB7 429 aa10.01□□□□□ -0.81
CASP12-201ENST00000375726 ITGB4P16144 1822 aa10□□□□□ -0.81
CASP12-201ENST00000375726 QTRT2Q9H974 415 aaKnown RBP10□□□□□ -0.81
CASP12-201ENST00000375726 PAPPAQ13219 1627 aa10□□□□□ -0.81
CASP12-201ENST00000375726 KDM6AO15550 1401 aaPredicted RBP10□□□□□ -0.81
CASP12-201ENST00000375726 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 NHSQ6T4R5 1651 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 TBC1D12O60347 775 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
CASP12-201ENST00000375726 MPRIPQ6WCQ1 1025 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 THUMPD2Q9BTF0 503 aaKnown RBP9.99□□□□□ -0.81
CASP12-201ENST00000375726 TSPYL4Q9UJ04 414 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
CASP12-201ENST00000375726 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 CYP27B1O15528 508 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 RNMTO43148 476 aaKnown RBP9.98□□□□□ -0.81
CASP12-201ENST00000375726 CABP4P57796 275 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 RBM6P78332 1123 aaKnown RBP9.98□□□□□ -0.81
CASP12-201ENST00000375726 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 BABAM1Q9NWV8 329 aa9.98□□□□□ -0.81
CASP12-201ENST00000375726 UBR2Q8IWV8 1755 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms