RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 PARP3Q9Y6F1 533 aa26.41■■□□□ 1.82
C6orf48-205ENST00000375640 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
C6orf48-205ENST00000375640 EIF5P55010 431 aaKnown RBP26.4■■□□□ 1.82
C6orf48-205ENST00000375640 FKBP8Q14318 412 aa26.4■■□□□ 1.82
C6orf48-205ENST00000375640 TJP1Q07157 1748 aa26.39■■□□□ 1.82
C6orf48-205ENST00000375640 A0A087WZG4 1122 aa26.39■■□□□ 1.82
C6orf48-205ENST00000375640 SNRPA1P09661 255 aaKnown RBP26.39■■□□□ 1.82
C6orf48-205ENST00000375640 WDR43Q15061 677 aaKnown RBP eCLIP26.39■■□□□ 1.827e-40■□□□□ 10.9
C6orf48-205ENST00000375640 PELP1Q8IZL8 1130 aaKnown RBP26.39■■□□□ 1.82
C6orf48-205ENST00000375640 USPL1Q5W0Q7 1092 aa26.38■■□□□ 1.81
C6orf48-205ENST00000375640 COL15A1P39059 1388 aa26.37■■□□□ 1.81
C6orf48-205ENST00000375640 GRIN3BO60391 1043 aa26.37■■□□□ 1.81
C6orf48-205ENST00000375640 TM4SF1P30408 202 aa26.37■■□□□ 1.81
C6orf48-205ENST00000375640 RIPK4P57078 832 aa26.37■■□□□ 1.81
C6orf48-205ENST00000375640 MYH14Q7Z406 1995 aaKnown RBP26.37■■□□□ 1.81
C6orf48-205ENST00000375640 IL6STP40189 918 aaPredicted RBP26.36■■□□□ 1.81
C6orf48-205ENST00000375640 MIS18AQ9NYP9 233 aa26.36■■□□□ 1.81
C6orf48-205ENST00000375640 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
C6orf48-205ENST00000375640 A1BGP04217 495 aa26.35■■□□□ 1.81
C6orf48-205ENST00000375640 TMPOP42166 694 aaKnown RBP26.35■■□□□ 1.81
C6orf48-205ENST00000375640 TGFB2P61812 414 aa26.35■■□□□ 1.81
C6orf48-205ENST00000375640 NPM2Q86SE8 214 aaKnown RBP26.34■■□□□ 1.81
C6orf48-205ENST00000375640 RUNDC1Q96C34 613 aa26.34■■□□□ 1.81
C6orf48-205ENST00000375640 ADAMTS8Q9UP79 889 aa26.34■■□□□ 1.81
C6orf48-205ENST00000375640 YBX3P16989 372 aaKnown RBP eCLIP26.33■■□□□ 1.812e-48■■□□□ 13.6
C6orf48-205ENST00000375640 LMOD3Q0VAK6 560 aa26.33■■□□□ 1.81
C6orf48-205ENST00000375640 THUMPD2Q9BTF0 503 aaKnown RBP26.33■■□□□ 1.81
C6orf48-205ENST00000375640 DDR1Q08345 913 aa26.32■■□□□ 1.8
C6orf48-205ENST00000375640 UBR2Q8IWV8 1755 aa26.32■■□□□ 1.8
C6orf48-205ENST00000375640 PRAMEF22A3QJZ6 481 aa26.31■■□□□ 1.8
C6orf48-205ENST00000375640 CCDC146Q8IYE0 955 aa26.31■■□□□ 1.8
C6orf48-205ENST00000375640 BCL2L12Q9HB09 334 aa26.31■■□□□ 1.8
C6orf48-205ENST00000375640 POLRMTO00411 1230 aaKnown RBP26.3■■□□□ 1.8
C6orf48-205ENST00000375640 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
C6orf48-205ENST00000375640 NFIXQ14938 502 aa26.29■■□□□ 1.8
C6orf48-205ENST00000375640 ZNF330Q9Y3S2 320 aaPredicted RBP26.29■■□□□ 1.8
C6orf48-205ENST00000375640 EIF4A1P60842 406 aaKnown RBP26.28■■□□□ 1.8
C6orf48-205ENST00000375640 BABAM1Q9NWV8 329 aa26.28■■□□□ 1.8
C6orf48-205ENST00000375640 TBC1D2BQ9UPU7 963 aa26.28■■□□□ 1.8
C6orf48-205ENST00000375640 C10orf71Q711Q0 1435 aa26.27■■□□□ 1.8
C6orf48-205ENST00000375640 GIGYF1O75420 1035 aaPredicted RBP26.26■■□□□ 1.79
C6orf48-205ENST00000375640 NEUROD2Q15784 382 aa26.26■■□□□ 1.79
C6orf48-205ENST00000375640 RRP7AQ9Y3A4 280 aaKnown RBP26.26■■□□□ 1.79
C6orf48-205ENST00000375640 VIRMAQ69YN4 1812 aaKnown RBP26.25■■□□□ 1.79
C6orf48-205ENST00000375640 A0A0G2JLW4 131 aa26.25■■□□□ 1.79
C6orf48-205ENST00000375640 UTRNP46939 3433 aa26.24■■□□□ 1.79
C6orf48-205ENST00000375640 DPEP1P16444 411 aa26.24■■□□□ 1.79
C6orf48-205ENST00000375640 TSPYL4Q9UJ04 414 aa26.24■■□□□ 1.79
C6orf48-205ENST00000375640 NBPF26B4DH59 902 aa26.23■■□□□ 1.79
C6orf48-205ENST00000375640 SERPINB2P05120 415 aa26.23■■□□□ 1.79
C6orf48-205ENST00000375640 NBPF10Q6P3W6 841 aaKnown RBP26.23■■□□□ 1.79
C6orf48-205ENST00000375640 DZIP3Q86Y13 1208 aaKnown RBP26.23■■□□□ 1.79
C6orf48-205ENST00000375640 NBPF15Q8N660 670 aa26.23■■□□□ 1.79
C6orf48-205ENST00000375640 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
C6orf48-205ENST00000375640 PIP4K2AP48426 406 aaPredicted RBP26.22■■□□□ 1.79
C6orf48-205ENST00000375640 TRIM35Q9UPQ4 493 aa26.22■■□□□ 1.79
C6orf48-205ENST00000375640 PXDNLA1KZ92 1463 aa26.22■■□□□ 1.79
C6orf48-205ENST00000375640 C4AP0C0L4 1744 aa26.22■■□□□ 1.79
C6orf48-205ENST00000375640 TBC1D9BQ66K14 1250 aa26.21■■□□□ 1.79
C6orf48-205ENST00000375640 BICDL1Q6ZP65 573 aa26.21■■□□□ 1.79
C6orf48-205ENST00000375640 WWC3Q9ULE0 1092 aa26.21■■□□□ 1.79
C6orf48-205ENST00000375640 ANP32CO43423 234 aa26.2■■□□□ 1.78
C6orf48-205ENST00000375640 KCNA3P22001 575 aa26.2■■□□□ 1.78
C6orf48-205ENST00000375640 CLEC4GQ6UXB4 293 aa26.2■■□□□ 1.78
C6orf48-205ENST00000375640 RGL2O15211 777 aa26.19■■□□□ 1.78
C6orf48-205ENST00000375640 SETDB2Q96T68 719 aa26.18■■□□□ 1.78
C6orf48-205ENST00000375640 PIM2Q9P1W9 311 aa26.18■■□□□ 1.78
C6orf48-205ENST00000375640 BCS1LQ9Y276 419 aa26.18■■□□□ 1.78
C6orf48-205ENST00000375640 CHL1O00533 1208 aa26.17■■□□□ 1.78
C6orf48-205ENST00000375640 ZNF784Q8NCA9 323 aaPredicted RBP26.16■■□□□ 1.78
C6orf48-205ENST00000375640 ZNF652Q9Y2D9 606 aa26.16■■□□□ 1.78
C6orf48-205ENST00000375640 APAF1O14727 1248 aa26.15■■□□□ 1.78
C6orf48-205ENST00000375640 CCDC184Q52MB2 194 aa26.15■■□□□ 1.78
C6orf48-205ENST00000375640 ERBB4Q15303 1308 aa26.14■■□□□ 1.77
C6orf48-205ENST00000375640 CARMIL3Q8ND23 1372 aa26.13■■□□□ 1.77
C6orf48-205ENST00000375640 CHRNA5P30532 468 aa26.13■■□□□ 1.77
C6orf48-205ENST00000375640 DALRD3Q5D0E6 543 aaKnown RBP26.13■■□□□ 1.77
C6orf48-205ENST00000375640 GOLGB1Q14789 3259 aaKnown RBP26.13■■□□□ 1.77
C6orf48-205ENST00000375640 LAS1LQ9Y4W2 734 aaKnown RBP26.12■■□□□ 1.77
C6orf48-205ENST00000375640 BRIP1Q9BX63 1249 aa26.11■■□□□ 1.77
C6orf48-205ENST00000375640 PDZRN3Q9UPQ7 1066 aa26.11■■□□□ 1.77
C6orf48-205ENST00000375640 DLG5Q8TDM6 1919 aa26.1■■□□□ 1.77
C6orf48-205ENST00000375640 ERVV-1B6SEH8 477 aa26.1■■□□□ 1.77
C6orf48-205ENST00000375640 PRR5LQ6MZQ0 368 aa26.1■■□□□ 1.77
C6orf48-205ENST00000375640 NGEFQ8N5V2 710 aa26.1■■□□□ 1.77
C6orf48-205ENST00000375640 CFAP44Q96MT7 982 aa26.1■■□□□ 1.77
C6orf48-205ENST00000375640 KIF13BQ9NQT8 1826 aa26.09■■□□□ 1.77
C6orf48-205ENST00000375640 H0YIN7 160 aa26.09■■□□□ 1.77
C6orf48-205ENST00000375640 MYL6BP14649 208 aa26.09■■□□□ 1.77
C6orf48-205ENST00000375640 EIF2S2P20042 333 aaKnown RBP26.09■■□□□ 1.77
C6orf48-205ENST00000375640 CALD1Q05682 793 aaKnown RBP26.09■■□□□ 1.77
C6orf48-205ENST00000375640 PDE6BP35913 854 aa26.08■■□□□ 1.77
C6orf48-205ENST00000375640 C2CD5Q86YS7 1000 aa26.08■■□□□ 1.77
C6orf48-205ENST00000375640 CNBD1Q8NA66 436 aa26.08■■□□□ 1.77
C6orf48-205ENST00000375640 MRS2Q9HD23 443 aa26.08■■□□□ 1.77
C6orf48-205ENST00000375640 KIF6Q6ZMV9 814 aa26.07■■□□□ 1.76
C6orf48-205ENST00000375640 ARHGAP27Q6ZUM4 889 aa26.07■■□□□ 1.76
C6orf48-205ENST00000375640 NIP7Q9Y221 180 aaKnown RBP eCLIP26.07■■□□□ 1.761e-323■■■□□ 14.9
C6orf48-205ENST00000375640 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
C6orf48-205ENST00000375640 NPHP1O15259 732 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms