RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 KIF20BQ96Q89 1820 aa24.49■■□□□ 1.51
H2AFX-201ENST00000375167 PDE4DIPQ5VU43 2346 aa24.48■■□□□ 1.51
H2AFX-201ENST00000375167 TM4SF1P30408 202 aa24.48■■□□□ 1.51
H2AFX-201ENST00000375167 CRKLP46109 303 aaKnown RBP24.48■■□□□ 1.51
H2AFX-201ENST00000375167 CFAP44Q96MT7 982 aa24.47■■□□□ 1.51
H2AFX-201ENST00000375167 NRXN2Q9P2S2 1712 aa24.47■■□□□ 1.51
H2AFX-201ENST00000375167 IQCA1LA6NCM1 817 aa24.46■■□□□ 1.51
H2AFX-201ENST00000375167 ERVV-2B6SEH9 535 aa24.46■■□□□ 1.51
H2AFX-201ENST00000375167 SCN4AP35499 1836 aa24.46■■□□□ 1.51
H2AFX-201ENST00000375167 ADAMTS7Q9UKP4 1686 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 RASSF10A6NK89 507 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 ZPR1O75312 459 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 DEFB115Q30KQ5 88 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 FER1L6Q2WGJ9 1857 aa24.44■■□□□ 1.5
H2AFX-201ENST00000375167 DDNO94850 711 aaPredicted RBP24.43■■□□□ 1.5
H2AFX-201ENST00000375167 H0YIN7 160 aa24.42■■□□□ 1.5
H2AFX-201ENST00000375167 BEGAINQ9BUH8 593 aa24.42■■□□□ 1.5
H2AFX-201ENST00000375167 WDR33Q9C0J8 1336 aaKnown RBP24.42■■□□□ 1.5
H2AFX-201ENST00000375167 TJP1Q07157 1748 aa24.42■■□□□ 1.5
H2AFX-201ENST00000375167 EMILIN1Q9Y6C2 1016 aa24.42■■□□□ 1.5
H2AFX-201ENST00000375167 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
H2AFX-201ENST00000375167 PTCD1O75127 700 aaKnown RBP24.41■■□□□ 1.5
H2AFX-201ENST00000375167 ITGBL1O95965 494 aaPredicted RBP24.41■■□□□ 1.5
H2AFX-201ENST00000375167 USPL1Q5W0Q7 1092 aa24.41■■□□□ 1.5
H2AFX-201ENST00000375167 THSD7BQ9C0I4 1608 aa24.4■■□□□ 1.5
H2AFX-201ENST00000375167 HSP90AB1P08238 724 aaKnown RBP24.4■■□□□ 1.5
H2AFX-201ENST00000375167 NFIXQ14938 502 aa24.39■■□□□ 1.49
H2AFX-201ENST00000375167 EYA1Q99502 592 aa24.39■■□□□ 1.49
H2AFX-201ENST00000375167 TAF1DQ9H5J8 278 aaPredicted RBP24.39■■□□□ 1.49
H2AFX-201ENST00000375167 PPM1GO15355 546 aaPredicted RBP24.38■■□□□ 1.49
H2AFX-201ENST00000375167 CABP4P57796 275 aa24.38■■□□□ 1.49
H2AFX-201ENST00000375167 LTBP3Q9NS15 1303 aa24.38■■□□□ 1.49
H2AFX-201ENST00000375167 EAPPQ56P03 285 aaPredicted RBP24.37■■□□□ 1.49
H2AFX-201ENST00000375167 L3MBTL3Q96JM7 780 aaPredicted RBP24.37■■□□□ 1.49
H2AFX-201ENST00000375167 TAOK3Q9H2K8 898 aa24.37■■□□□ 1.49
H2AFX-201ENST00000375167 ABT1Q9ULW3 272 aaKnown RBP24.37■■□□□ 1.49
H2AFX-201ENST00000375167 SERPINB2P05120 415 aa24.36■■□□□ 1.49
H2AFX-201ENST00000375167 ZNF219Q9P2Y4 722 aaPredicted RBP24.36■■□□□ 1.49
H2AFX-201ENST00000375167 C21orf2O43822 256 aa24.35■■□□□ 1.49
H2AFX-201ENST00000375167 CLEC11AQ9Y240 323 aa24.35■■□□□ 1.49
H2AFX-201ENST00000375167 TNRC18O15417 2968 aaPredicted RBP24.34■■□□□ 1.49
H2AFX-201ENST00000375167 CARMIL3Q8ND23 1372 aa24.34■■□□□ 1.49
H2AFX-201ENST00000375167 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
H2AFX-201ENST00000375167 INTS5Q6P9B9 1019 aaKnown RBP24.33■■□□□ 1.49
H2AFX-201ENST00000375167 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
H2AFX-201ENST00000375167 ADAMTSL1Q8N6G6 1762 aa24.33■■□□□ 1.49
H2AFX-201ENST00000375167 NEUROD1Q13562 356 aa24.32■■□□□ 1.48
H2AFX-201ENST00000375167 MCOLN1Q9GZU1 580 aa24.32■■□□□ 1.48
H2AFX-201ENST00000375167 SOS1Q07889 1333 aaPredicted RBP24.31■■□□□ 1.48
H2AFX-201ENST00000375167 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
H2AFX-201ENST00000375167 SLC24A1O60721 1099 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 ECE1P42892 770 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 PAXIP1Q6ZW49 1069 aaPredicted RBP24.3■■□□□ 1.48
H2AFX-201ENST00000375167 TESK2Q96S53 571 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 PDZRN3Q9UPQ7 1066 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 COL11A2P13942 1736 aaPredicted RBP24.3■■□□□ 1.48
H2AFX-201ENST00000375167 ANKRD31Q8N7Z5 1873 aa24.3■■□□□ 1.48
H2AFX-201ENST00000375167 HACL1Q9UJ83 578 aa24.29■■□□□ 1.48
H2AFX-201ENST00000375167 CNTROBQ8N137 903 aa24.29■■□□□ 1.48
H2AFX-201ENST00000375167 CAPNS2Q96L46 248 aa24.29■■□□□ 1.48
H2AFX-201ENST00000375167 COL15A1P39059 1388 aa24.28■■□□□ 1.48
H2AFX-201ENST00000375167 CACNA1SQ13698 1873 aa24.28■■□□□ 1.48
H2AFX-201ENST00000375167 LTBP1Q14766 1721 aa24.28■■□□□ 1.48
H2AFX-201ENST00000375167 EPHX2P34913 555 aa24.27■■□□□ 1.48
H2AFX-201ENST00000375167 MAP1SQ66K74 1059 aaPredicted RBP24.27■■□□□ 1.48
H2AFX-201ENST00000375167 PNMA8AQ86V59 439 aaPredicted RBP24.27■■□□□ 1.48
H2AFX-201ENST00000375167 TSKSQ9UJT2 592 aa24.27■■□□□ 1.48
H2AFX-201ENST00000375167 PDE6BP35913 854 aa24.26■■□□□ 1.47
H2AFX-201ENST00000375167 GRM1Q13255 1194 aa24.26■■□□□ 1.47
H2AFX-201ENST00000375167 SOGA3Q5TF21 947 aa24.26■■□□□ 1.47
H2AFX-201ENST00000375167 ZNF530Q6P9A1 599 aaPredicted RBP24.26■■□□□ 1.47
H2AFX-201ENST00000375167 GPR101Q96P66 508 aaPredicted RBP24.26■■□□□ 1.47
H2AFX-201ENST00000375167 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
H2AFX-201ENST00000375167 BCL2L12Q9HB09 334 aa24.24■■□□□ 1.47
H2AFX-201ENST00000375167 CASP8AP2Q9UKL3 1982 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 ARFGEF2Q9Y6D5 1785 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 ST20-MTHFSA0A0A6YYL1 179 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 MTHFSP49914 203 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 PRPF38BQ5VTL8 546 aaKnown RBP24.23■■□□□ 1.47
H2AFX-201ENST00000375167 DNAJC10Q8IXB1 793 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 NFATC2IPQ8NCF5 419 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
H2AFX-201ENST00000375167 SLX4Q8IY92 1834 aa24.22■■□□□ 1.47
H2AFX-201ENST00000375167 CA12O43570 354 aa24.22■■□□□ 1.47
H2AFX-201ENST00000375167 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
H2AFX-201ENST00000375167 DGKZQ13574 1117 aa24.21■■□□□ 1.47
H2AFX-201ENST00000375167 CYP4F22Q6NT55 531 aa24.21■■□□□ 1.47
H2AFX-201ENST00000375167 BICDL1Q6ZP65 573 aa24.21■■□□□ 1.47
H2AFX-201ENST00000375167 CNKSR1Q969H4 720 aa24.21■■□□□ 1.47
H2AFX-201ENST00000375167 C1orf141Q5JVX7 400 aa24.2■■□□□ 1.46
H2AFX-201ENST00000375167 ZNF541Q9H0D2 1346 aa24.2■■□□□ 1.46
H2AFX-201ENST00000375167 EIF4A2Q14240 407 aaKnown RBP24.19■■□□□ 1.46
H2AFX-201ENST00000375167 AMOTQ4VCS5 1084 aa24.19■■□□□ 1.46
H2AFX-201ENST00000375167 PRPF40BQ6NWY9 871 aaKnown RBP24.18■■□□□ 1.46
H2AFX-201ENST00000375167 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
H2AFX-201ENST00000375167 TRPM7Q96QT4 1865 aa24.18■■□□□ 1.46
H2AFX-201ENST00000375167 CYP19A1P11511 503 aaPredicted RBP24.17■■□□□ 1.46
H2AFX-201ENST00000375167 MAP2K2P36507 400 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms