RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 HSPA8P11142 646 aaKnown RBP13.1□□□□□ -0.31
HLA-DOA-202ENST00000374813 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
HLA-DOA-202ENST00000374813 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
HLA-DOA-202ENST00000374813 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
HLA-DOA-202ENST00000374813 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
HLA-DOA-202ENST00000374813 PPM1GO15355 546 aaPredicted RBP13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 CABP4P57796 275 aa13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 EYA1Q99502 592 aa13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 TNRC18O15417 2968 aaPredicted RBP13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
HLA-DOA-202ENST00000374813 PTCD1O75127 700 aaKnown RBP13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 EMILIN1Q9Y6C2 1016 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
HLA-DOA-202ENST00000374813 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
HLA-DOA-202ENST00000374813 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
HLA-DOA-202ENST00000374813 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
HLA-DOA-202ENST00000374813 ITGBL1O95965 494 aaPredicted RBP13.06□□□□□ -0.32
HLA-DOA-202ENST00000374813 SERPINB2P05120 415 aa13.06□□□□□ -0.32
HLA-DOA-202ENST00000374813 TESK2Q96S53 571 aa13.06□□□□□ -0.32
HLA-DOA-202ENST00000374813 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
HLA-DOA-202ENST00000374813 SCN4AP35499 1836 aa13.05□□□□□ -0.32
HLA-DOA-202ENST00000374813 NFIXQ14938 502 aa13.05□□□□□ -0.32
HLA-DOA-202ENST00000374813 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
HLA-DOA-202ENST00000374813 NARFQ9UHQ1 456 aa13.05□□□□□ -0.32
HLA-DOA-202ENST00000374813 LTBP3Q9NS15 1303 aa13.05□□□□□ -0.32
HLA-DOA-202ENST00000374813 DLEC1Q9Y238 1755 aa13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 C21orf2O43822 256 aa13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
HLA-DOA-202ENST00000374813 PDE6BP35913 854 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 MTHFSP49914 203 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 SOGA3Q5TF21 947 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
HLA-DOA-202ENST00000374813 FER1L6Q2WGJ9 1857 aa13.02□□□□□ -0.32
HLA-DOA-202ENST00000374813 ECE1P42892 770 aa13.02□□□□□ -0.33
HLA-DOA-202ENST00000374813 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
HLA-DOA-202ENST00000374813 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.33
HLA-DOA-202ENST00000374813 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
HLA-DOA-202ENST00000374813 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
HLA-DOA-202ENST00000374813 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
HLA-DOA-202ENST00000374813 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
HLA-DOA-202ENST00000374813 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
HLA-DOA-202ENST00000374813 CDCA8Q53HL2 280 aa13□□□□□ -0.33
HLA-DOA-202ENST00000374813 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
HLA-DOA-202ENST00000374813 ZNF530Q6P9A1 599 aaPredicted RBP13□□□□□ -0.33
HLA-DOA-202ENST00000374813 CNKSR1Q969H4 720 aa13□□□□□ -0.33
HLA-DOA-202ENST00000374813 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
HLA-DOA-202ENST00000374813 HACL1Q9UJ83 578 aa13□□□□□ -0.33
HLA-DOA-202ENST00000374813 CA12O43570 354 aa12.99□□□□□ -0.33
HLA-DOA-202ENST00000374813 GPR101Q96P66 508 aaPredicted RBP12.99□□□□□ -0.33
HLA-DOA-202ENST00000374813 EPHX2P34913 555 aa12.98□□□□□ -0.33
HLA-DOA-202ENST00000374813 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
HLA-DOA-202ENST00000374813 CYP19A1P11511 503 aaPredicted RBP12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 MAP2K2P36507 400 aa12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 CAPNS2Q96L46 248 aa12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
HLA-DOA-202ENST00000374813 COL15A1P39059 1388 aa12.96□□□□□ -0.33
HLA-DOA-202ENST00000374813 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
HLA-DOA-202ENST00000374813 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
HLA-DOA-202ENST00000374813 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
HLA-DOA-202ENST00000374813 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
HLA-DOA-202ENST00000374813 A0A087WZG4 1122 aa12.95□□□□□ -0.34
HLA-DOA-202ENST00000374813 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
HLA-DOA-202ENST00000374813 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
HLA-DOA-202ENST00000374813 TJP1Q07157 1748 aa12.95□□□□□ -0.34
HLA-DOA-202ENST00000374813 ANKRD26Q9UPS8 1709 aa12.95□□□□□ -0.34
HLA-DOA-202ENST00000374813 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
HLA-DOA-202ENST00000374813 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
HLA-DOA-202ENST00000374813 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
HLA-DOA-202ENST00000374813 CARD14Q9BXL6 1004 aa12.94□□□□□ -0.34
HLA-DOA-202ENST00000374813 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
HLA-DOA-202ENST00000374813 NPHP1O15259 732 aa12.93□□□□□ -0.34
HLA-DOA-202ENST00000374813 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
HLA-DOA-202ENST00000374813 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
HLA-DOA-202ENST00000374813 SRGNP10124 158 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 GRM1Q13255 1194 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 DGKZQ13574 1117 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 PRR5LQ6MZQ0 368 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 CYP4F22Q6NT55 531 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 GPC2Q8N158 579 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms