RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 ARHGEF25Q86VW2 580 aa24.39■■□□□ 1.5
SUSD1-204ENST00000374270 ZNF330Q9Y3S2 320 aaPredicted RBP24.39■■□□□ 1.5
SUSD1-204ENST00000374270 ESYT1Q9BSJ8 1104 aa24.39■■□□□ 1.49
SUSD1-204ENST00000374270 CHMLP26374 656 aa24.37■■□□□ 1.49
SUSD1-204ENST00000374270 RIC3Q7Z5B4 369 aa24.37■■□□□ 1.49
SUSD1-204ENST00000374270 CPA1P15085 419 aa24.37■■□□□ 1.49
SUSD1-204ENST00000374270 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
SUSD1-204ENST00000374270 GOLGA6L22H0YM25 854 aa24.37■■□□□ 1.49
SUSD1-204ENST00000374270 BEND3Q5T5X7 828 aa24.36■■□□□ 1.49
SUSD1-204ENST00000374270 TOPAZ1Q8N9V7 1692 aa24.35■■□□□ 1.49
SUSD1-204ENST00000374270 CCDC8Q9H0W5 538 aaPredicted RBP24.35■■□□□ 1.49
SUSD1-204ENST00000374270 PRPF40AO75400 957 aaKnown RBP24.35■■□□□ 1.49
SUSD1-204ENST00000374270 DBF4Q9UBU7 674 aaPredicted RBP24.35■■□□□ 1.49
SUSD1-204ENST00000374270 ANKARQ7Z5J8 1434 aa24.35■■□□□ 1.49
SUSD1-204ENST00000374270 BAG4O95429 457 aaKnown RBP24.35■■□□□ 1.49
SUSD1-204ENST00000374270 AK9Q5TCS8 1911 aa24.34■■□□□ 1.49
SUSD1-204ENST00000374270 GAS2L3Q86XJ1 694 aa24.34■■□□□ 1.49
SUSD1-204ENST00000374270 EIF5BO60841 1220 aaKnown RBP24.33■■□□□ 1.49
SUSD1-204ENST00000374270 GIGYF1O75420 1035 aaPredicted RBP24.33■■□□□ 1.49
SUSD1-204ENST00000374270 IBTKQ9P2D0 1353 aaPredicted RBP24.33■■□□□ 1.49
SUSD1-204ENST00000374270 MCCP23508 829 aa24.33■■□□□ 1.49
SUSD1-204ENST00000374270 DDIT3P35638 169 aa24.33■■□□□ 1.49
SUSD1-204ENST00000374270 CAVIN1Q6NZI2 390 aaKnown RBP24.33■■□□□ 1.49
SUSD1-204ENST00000374270 ATP5J2-PTCD1G3V325 749 aa24.32■■□□□ 1.48
SUSD1-204ENST00000374270 PTCD1O75127 700 aaKnown RBP24.32■■□□□ 1.48
SUSD1-204ENST00000374270 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
SUSD1-204ENST00000374270 TMX3Q96JJ7 454 aa24.31■■□□□ 1.48
SUSD1-204ENST00000374270 AMOTQ4VCS5 1084 aa24.31■■□□□ 1.48
SUSD1-204ENST00000374270 GDPD2Q9HCC8 539 aa24.31■■□□□ 1.48
SUSD1-204ENST00000374270 RBM27Q9P2N5 1060 aaKnown RBP24.31■■□□□ 1.48
SUSD1-204ENST00000374270 IFIT2P09913 472 aaKnown RBP24.3■■□□□ 1.48
SUSD1-204ENST00000374270 AACSQ86V21 672 aa24.3■■□□□ 1.48
SUSD1-204ENST00000374270 SSH3Q8TE77 659 aa24.3■■□□□ 1.48
SUSD1-204ENST00000374270 NDUFB9Q9Y6M9 179 aa24.3■■□□□ 1.48
SUSD1-204ENST00000374270 CIZ1Q9ULV3 898 aaPredicted RBP24.3■■□□□ 1.48
SUSD1-204ENST00000374270 PXDNQ92626 1479 aa24.29■■□□□ 1.48
SUSD1-204ENST00000374270 KIF1BPQ96EK5 621 aa24.29■■□□□ 1.48
SUSD1-204ENST00000374270 MYD88Q99836 296 aa24.29■■□□□ 1.48
SUSD1-204ENST00000374270 KCNJ4P48050 445 aa24.29■■□□□ 1.48
SUSD1-204ENST00000374270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.29■■□□□ 1.48
SUSD1-204ENST00000374270 KIAA1211Q6ZU35 1233 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 COPS6Q7L5N1 327 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 CLASRPQ8N2M8 674 aaKnown RBP24.28■■□□□ 1.48
SUSD1-204ENST00000374270 A0A0G2JS52 829 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 XAGE3Q8WTP9 111 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 GRPEL1Q9HAV7 217 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 NPHP4O75161 1426 aaPredicted RBP24.28■■□□□ 1.48
SUSD1-204ENST00000374270 C19orf44Q9H6X5 657 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 USP16Q9Y5T5 823 aa24.28■■□□□ 1.48
SUSD1-204ENST00000374270 TATP17735 454 aaPredicted RBP24.27■■□□□ 1.48
SUSD1-204ENST00000374270 SUCLG2Q96I99 432 aa24.27■■□□□ 1.48
SUSD1-204ENST00000374270 DIAPH3Q9NSV4 1193 aa24.27■■□□□ 1.48
SUSD1-204ENST00000374270 BOLA2Q9H3K6 86 aa24.27■■□□□ 1.48
SUSD1-204ENST00000374270 BICC1Q9H694 974 aaKnown RBP24.27■■□□□ 1.48
SUSD1-204ENST00000374270 RGPD1P0DJD0 1748 aa24.27■■□□□ 1.48
SUSD1-204ENST00000374270 ADCY9O60503 1353 aa24.27■■□□□ 1.48
SUSD1-204ENST00000374270 TTC5Q8N0Z6 440 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 ZNF496Q96IT1 587 aaPredicted RBP24.26■■□□□ 1.47
SUSD1-204ENST00000374270 OSBPL3Q9H4L5 887 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 ADGRL3Q9HAR2 1447 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 NWD1Q149M9 1564 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 KSR2Q6VAB6 950 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 STRN4Q9NRL3 753 aa24.26■■□□□ 1.47
SUSD1-204ENST00000374270 CEMIPQ8WUJ3 1361 aa24.25■■□□□ 1.47
SUSD1-204ENST00000374270 NALCNQ8IZF0 1738 aa24.25■■□□□ 1.47
SUSD1-204ENST00000374270 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
SUSD1-204ENST00000374270 G3BP1Q13283 466 aaKnown RBP eCLIP24.24■■□□□ 1.47
SUSD1-204ENST00000374270 ZNF790Q6PG37 636 aa24.24■■□□□ 1.47
SUSD1-204ENST00000374270 TCEANC2Q96MN5 208 aa24.24■■□□□ 1.47
SUSD1-204ENST00000374270 CNTROBQ8N137 903 aa24.24■■□□□ 1.47
SUSD1-204ENST00000374270 TLR7Q9NYK1 1049 aaKnown RBP24.24■■□□□ 1.47
SUSD1-204ENST00000374270 FMN2Q9NZ56 1722 aa24.23■■□□□ 1.47
SUSD1-204ENST00000374270 ERBB3P21860 1342 aa24.23■■□□□ 1.47
SUSD1-204ENST00000374270 NUCB2P80303 420 aa24.23■■□□□ 1.47
SUSD1-204ENST00000374270 RRAGDQ9NQL2 400 aaPredicted RBP24.22■■□□□ 1.47
SUSD1-204ENST00000374270 NCOA3Q9Y6Q9 1424 aa24.22■■□□□ 1.47
SUSD1-204ENST00000374270 SALL3Q9BXA9 1300 aa24.22■■□□□ 1.47
SUSD1-204ENST00000374270 PI4K2BQ8TCG2 481 aa24.22■■□□□ 1.47
SUSD1-204ENST00000374270 RASEFQ8IZ41 740 aa24.21■■□□□ 1.47
SUSD1-204ENST00000374270 CCDC85AQ96PX6 553 aaPredicted RBP24.21■■□□□ 1.47
SUSD1-204ENST00000374270 GRM8O00222 908 aa24.21■■□□□ 1.47
SUSD1-204ENST00000374270 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
SUSD1-204ENST00000374270 PRPF40BQ6NWY9 871 aaKnown RBP24.21■■□□□ 1.47
SUSD1-204ENST00000374270 ZDHHC9Q9Y397 364 aa24.21■■□□□ 1.47
SUSD1-204ENST00000374270 RAB11FIP3O75154 756 aa24.2■■□□□ 1.46
SUSD1-204ENST00000374270 NEXNQ0ZGT2 675 aa24.2■■□□□ 1.46
SUSD1-204ENST00000374270 UBE3BQ7Z3V4 1068 aa24.2■■□□□ 1.46
SUSD1-204ENST00000374270 POLA2Q14181 598 aa24.19■■□□□ 1.46
SUSD1-204ENST00000374270 TMEM94Q12767 1356 aa24.19■■□□□ 1.46
SUSD1-204ENST00000374270 MRE11P49959 708 aa24.19■■□□□ 1.46
SUSD1-204ENST00000374270 CABP4P57796 275 aa24.19■■□□□ 1.46
SUSD1-204ENST00000374270 BABAM1Q9NWV8 329 aa24.19■■□□□ 1.46
SUSD1-204ENST00000374270 NSFL1CQ9UNZ2 370 aaKnown RBP24.19■■□□□ 1.46
SUSD1-204ENST00000374270 XRN1Q8IZH2 1706 aaKnown RBP24.18■■□□□ 1.46
SUSD1-204ENST00000374270 EPHA10Q5JZY3 1008 aa24.18■■□□□ 1.46
SUSD1-204ENST00000374270 TOM1L2Q6ZVM7 507 aa24.18■■□□□ 1.46
SUSD1-204ENST00000374270 CHGBP05060 677 aa24.18■■□□□ 1.46
SUSD1-204ENST00000374270 CASTP20810 708 aaKnown RBP24.18■■□□□ 1.46
SUSD1-204ENST00000374270 PTH1RQ03431 593 aa24.18■■□□□ 1.46
SUSD1-204ENST00000374270 RNF214Q8ND24 703 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms