RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
LMX1B-202ENST00000373474 AMOTQ4VCS5 1084 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 MYD88Q99836 296 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 MCM5P33992 734 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
LMX1B-202ENST00000373474 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
LMX1B-202ENST00000373474 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
LMX1B-202ENST00000373474 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
LMX1B-202ENST00000373474 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
LMX1B-202ENST00000373474 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
LMX1B-202ENST00000373474 KLHL40Q2TBA0 621 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 DUOX2Q9NRD8 1548 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 CBX1P83916 185 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 CCDC91Q7Z6B0 441 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 TCOF1Q13428 1488 aaKnown RBP16.53■□□□□ 0.24
LMX1B-202ENST00000373474 ZSCAN12O43309 604 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
LMX1B-202ENST00000373474 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
LMX1B-202ENST00000373474 GJB2P29033 226 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 FLIIQ13045 1269 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
LMX1B-202ENST00000373474 RAI14Q9P0K7 980 aa16.53■□□□□ 0.24
LMX1B-202ENST00000373474 UVSSAQ2YD98 709 aa16.52■□□□□ 0.24
LMX1B-202ENST00000373474 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
LMX1B-202ENST00000373474 USP25Q9UHP3 1055 aa16.52■□□□□ 0.24
LMX1B-202ENST00000373474 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.23
LMX1B-202ENST00000373474 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.23
LMX1B-202ENST00000373474 STX6O43752 255 aa16.52■□□□□ 0.23
LMX1B-202ENST00000373474 METTL24Q5JXM2 366 aa16.52■□□□□ 0.23
LMX1B-202ENST00000373474 LRP2BPQ9P2M1 347 aa16.52■□□□□ 0.23
LMX1B-202ENST00000373474 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-202ENST00000373474 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-202ENST00000373474 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 IGHMBP2P38935 993 aaKnown RBP16.51■□□□□ 0.23
LMX1B-202ENST00000373474 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
LMX1B-202ENST00000373474 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
LMX1B-202ENST00000373474 GOLGA6L10A0A0M3HER8 536 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 NEMFO60524 1076 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
LMX1B-202ENST00000373474 CASQ1P31415 396 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 FANCAO15360 1455 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 JAKMIP3Q5VZ66 844 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 TAF4BQ92750 862 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 KIAA1328Q86T90 577 aa16.5■□□□□ 0.23
LMX1B-202ENST00000373474 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
LMX1B-202ENST00000373474 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 ATP2B2Q01814 1243 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
LMX1B-202ENST00000373474 ADCY5O95622 1261 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 STARD3NLO95772 234 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 PCDHB15Q9Y5E8 787 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
LMX1B-202ENST00000373474 UBE2HP62256 183 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 GPATCH11Q8N954 259 aa16.49■□□□□ 0.23
LMX1B-202ENST00000373474 BMP2KQ9NSY1 1161 aaPredicted RBP16.49■□□□□ 0.23
LMX1B-202ENST00000373474 STX1AQ16623 288 aa16.48■□□□□ 0.23
LMX1B-202ENST00000373474 CKAP2LQ8IYA6 745 aa16.48■□□□□ 0.23
LMX1B-202ENST00000373474 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
LMX1B-202ENST00000373474 SNX21Q969T3 373 aa16.48■□□□□ 0.23
LMX1B-202ENST00000373474 LRSAM1Q6UWE0 723 aa16.48■□□□□ 0.23
LMX1B-202ENST00000373474 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
LMX1B-202ENST00000373474 PRDM11Q9NQV5 511 aa16.48■□□□□ 0.23
LMX1B-202ENST00000373474 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
LMX1B-202ENST00000373474 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
LMX1B-202ENST00000373474 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 TNNT1P13805 278 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 ZC3H6P61129 1189 aaKnown RBP16.47■□□□□ 0.23
LMX1B-202ENST00000373474 GDPD2Q9HCC8 539 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 IDI1Q13907 227 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
LMX1B-202ENST00000373474 CCDC196A0A1B0GTZ2 297 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
LMX1B-202ENST00000373474 GSDMDP57764 484 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 GUCY1B3Q02153 619 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 SPATA24Q86W54 205 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 TIGD1Q96MW7 591 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
LMX1B-202ENST00000373474 ZNF213O14771 459 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 SDSP20132 328 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
LMX1B-202ENST00000373474 FSIP1Q8NA03 581 aa16.46■□□□□ 0.23
LMX1B-202ENST00000373474 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms